Gene Information

Name : Sputw3181_1113 (Sputw3181_1113)
Accession : YP_962516.1
Strain : Shewanella sp. W3-18-1
Genome accession: NC_008750
Putative virulence/resistance : Unknown
Product : IstB ATP binding domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1262840 - 1263595 bp
Length : 756 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; IstB ATP binding N-terminal domain protein; SMART: AAA ATPase; KEGG: hch:HCH_06235 IstB helper protein, IS21 family

DNA sequence :
ATGTTGAAACATCCCACACTGGATAAGCTCCACGCCCTCAAACTGACCGGCATGGCCGCCGCCCTGGAGGATCAGTCGGC
CACCCCCGACATCACCGATCTGAGCTTCGAGGAGCGCCTCGGGCTGCTGGTCGACCGGGAAATGACGGAACGGGACAACC
GGCGCATGAGCAGCCGGCTACGCCGGGCCAAACTGCGACACGCCGCCATCCTCGAAGACATTGATTACCGGAACTCACGC
GGCCTGGATAAAGGGCTTATCCAGGGCCTAGCCAGCTGCCAGTGGGTGAAGGAACACCTGAACGCGCTGATCACCGGTCC
CACCGGGGTCGGGAAAACCTGGCTGGCCTGTGCTCTGGCACACAAAGCCTGCCGGGAGGGTTACACCGCCCAGTACGTCC
GCCTGACCCGACTGCTACGGGAGCTGACCATTGCCAAAGGCGATGGCCAATACTCAAAACTCCTGACGGATCTGGCCAAG
GTCGACGTGCTGATCCTGGATGACTGGGGGCTGATGAAACTGAGCGCCGAGAATCGGCGAGACTTGCTGGAGGTGCTGGA
AGACCGGCATGGCAGGCGCTCCACCATTGCCACTAGCCAATTACCCATCGAGGAATGGCATGGCGTAATCGGTGACGCCA
CTCTGGCAGACGCCATTCTGGATCGGCTCGTACACAACGCCTACAAGATCAACCTGCGGGGCGAATCCATGCGAAAACAA
CAGGCAAAGTTGACGGCCACCGAGACTTCGGAGTAA

Protein sequence :
MLKHPTLDKLHALKLTGMAAALEDQSATPDITDLSFEERLGLLVDREMTERDNRRMSSRLRRAKLRHAAILEDIDYRNSR
GLDKGLIQGLASCQWVKEHLNALITGPTGVGKTWLACALAHKACREGYTAQYVRLTRLLRELTIAKGDGQYSKLLTDLAK
VDVLILDDWGLMKLSAENRRDLLEVLEDRHGRRSTIATSQLPIEEWHGVIGDATLADAILDRLVHNAYKINLRGESMRKQ
QAKLTATETSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 5e-46 52
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 5e-46 52
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 2e-45 51
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 4e-40 49