|
Name : Dvul_2988 (Dvul_2988) Accession : YP_961187.1 Strain : Genome accession: NC_008741 Putative virulence/resistance : Virulence Product : type III secretion system ATPase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 49446 - 50762 bp Length : 1317 bp Strand : - Note : KEGG: dvu:DVUA0119 type III secretion system ATPase; TIGRFAM: ATPase, FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector DNA sequence : ATGGCCTTCGAATACATAGGCCCGCTGCTTGAAGAGGCCGTCAACAGCGGCCCCTCGGTCGAGGTGCGCGGTCGCGTCGA ACAGGTGGTGGGAACCATCATCCGCGCCGTGGTGCCGGGGGTGAAGGTCGGCGAACTATGCCTGCTGCGCAACCCGTGGG ACGACTGGAACCTGCGGGCAGAGGTGGTGGGCTTCGTCAAGCATGTGGCGTTGCTCACGCCGCTGGGCAATCTTCAGGGC ATCTCGCCTGCCACCGAGGTCATCCCCACCGGCGAGATTCTCTCCATCCCCGTCGGTGAAGACCTCCTAGGGCGCGTCCT CGACGGCCTTGGCGACCCCATCGACGGCGGCCCGCCGCTGAAGCCGCGCACCCGCTACCCCGTCTACGCCGACCCGCCCA ACCCCATGACGCGCCGCATCATCGACAGGCCCATCTCGCTGGGGCTGCGTGTCCTCGACGGGGTGCTCACCTGCGGCGAA GGCCAGCGCATGGGCATCTTCGCGGCTGCGGGCGGCGGCAAGAGCACCCTTCTCTCGAGCATCATCAAGGGATGCTCGGC GGATGTGTGCGTGCTCGCGCTCATCGGTGAACGCGGGCGAGAGGTGCGCGAGTTCATCGAACACGACCTCGGCCCCGAAG GACGCAAGAAGGCGGTGCTGGTGGTATCCACCTCGGACCGTTCGTCCATGGAACGGCTGAAGGCCGCCTACACGGCGACC GCCATCGCCGAATATTTCCGCGACCAGCGGCGCAGCGTGCTGCTGATGATGGACTCGGTGACGCGCTTCGGGCGCGCCCA GCGCGAGATAGGGCTGGCAGCGGGCGAACCGCCCACGCGCCGAGGCTTTCCGCCGTCGGTCTTCTCGACCCTGCCGCGCC TCATGGAACGTGCGGGCAACTCCGACAGGGGTTCCATCACCGCGCTATACACCGTGCTGGTGGAAGGCGACGACATGACA GAACCCATCGCCGACGAGACGCGCTCCATCCTCGACGGGCACATCGTCCTCTCGCGCAAGCTGGCGGCAGCCAACCACTA CCCCGCCATCGACGTGCAGGCCAGCGTCAGCCGCGTCATGAACGCCATCGTCGGCAAGGAGCACAAGGGCGCGGCGCAGA AACTGCGCAAGATTCTCGCCAAATACGCCGAAGTGGAACTGCTGGTGCAGATTGGCGAATACAAGAAGGGTTCCGACAAG GAGGCCGACGACGCGCTGGCGCGAGTGGGCGCGGTGAACGCCTTCCTGCGGCAGGGTCTCGACGAGCGCAGCACCTTCGA CGAGACGCTGGCGGCCCTGTACAAGGCCACGGAGTAA Protein sequence : MAFEYIGPLLEEAVNSGPSVEVRGRVEQVVGTIIRAVVPGVKVGELCLLRNPWDDWNLRAEVVGFVKHVALLTPLGNLQG ISPATEVIPTGEILSIPVGEDLLGRVLDGLGDPIDGGPPLKPRTRYPVYADPPNPMTRRIIDRPISLGLRVLDGVLTCGE GQRMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTAT AIAEYFRDQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDRGSITALYTVLVEGDDMT EPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVGKEHKGAAQKLRKILAKYAEVELLVQIGEYKKGSDK EADDALARVGAVNAFLRQGLDERSTFDETLAALYKATE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 1e-122 | 70 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 4e-99 | 59 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 6e-99 | 59 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-99 | 59 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 5e-99 | 59 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 8e-100 | 59 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-99 | 59 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 8e-100 | 59 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-96 | 59 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-96 | 59 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 3e-90 | 59 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-79 | 52 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-78 | 51 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 2e-78 | 51 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 3e-79 | 51 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 3e-79 | 51 |
| hrpJ4 | AAA81942.1 | HrpJ4 | Virulence | Hrp PAI | Protein | 6e-74 | 50 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 5e-72 | 50 |
| hrcN | ABQ88354.1 | HrcN | Virulence | Hrp PAI | Protein | 6e-74 | 50 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 2e-79 | 49 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 6e-79 | 48 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 3e-79 | 48 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 6e-81 | 48 |
| invC | AAS66861.1 | InvC | Not tested | SSR-2 | Protein | 2e-73 | 47 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 1e-84 | 47 |
| invC | YP_217813.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 6e-73 | 45 |
| spaI | NP_457288.1 | secretory apparatus ATP synthase (associated with virulence) | Virulence | SPI-1 | Protein | 6e-73 | 45 |
| spaI | NP_806497.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 6e-73 | 45 |
| invC | NP_461815.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 6e-73 | 45 |
| ECs3730 | NP_311757.1 | ATP synthase SpaL | Not tested | LIM | Protein | 4e-72 | 45 |
| ysaN | AAS66842.1 | YsaN | Not tested | SSR-1 | Protein | 9e-72 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG0390 | Protein | 8e-127 | 72 |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG0192 | Protein | 9e-124 | 70 |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG0048 | Protein | 2e-128 | 67 |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG2144 | Protein | 2e-99 | 53 |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG1254 | Protein | 3e-78 | 50 |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG2331 | Protein | 8e-71 | 50 |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG2459 | Protein | 3e-81 | 48 |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG0555 | Protein | 3e-73 | 45 |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG1008 | Protein | 1e-71 | 44 |
| Dvul_2988 | YP_961187.1 | type III secretion system ATPase | VFG1778 | Protein | 3e-76 | 44 |
