Gene Information

Name : Maqu_0874 (Maqu_0874)
Accession : YP_958157.1
Strain : Marinobacter aquaeolei VT8
Genome accession: NC_008740
Putative virulence/resistance : Virulence
Product : two component, sigma54 specific, Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 992469 - 993863 bp
Length : 1395 bp
Strand : -
Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: hch:HCH_05925 sigma 54-dependent transcriptional activator containing CheY-like receiver domain

DNA sequence :
ATGACTACACAGACAGCGCTGATTGTTGACGACGAGCCGGATATCCGGGATCTACTGGAAATCACCCTCACCCGGATGGG
CATTACCACCTACACCGCCCCCGATCTGGCCAGCGCCAGGGAACTACTGCAGCAGCACAATCCCCAGCTCTGCCTGACAG
ACATGAACCTGCCCGACGGCAATGGTATAGACCTTGTTCACTGGATTCAGCAACACACTCCCTGCACCCCCGTTGCAGTG
ATCACCGCCTATGGCAGCATGGACACGGCTATCGAATCGCTCAAAGCCGGCGCTTTTGACTTCGTATCCAAGCCCGTGGA
GCTGCCCCGCCTGCGGGAACTGGTCAACAGCGCTCTGAAGCTGTCAGAACCCCAGACCGGCGAAACCGCCGAGTCCGATG
AGCCCGGCCTGCTTCTGGGCGACTCGCCGCAAATCCGGAAACTGCGCACACAGACGAAAAAGCTCGCCAGAAGTCAGGCA
CCGGTGTTTATCAGCGGCGAATCCGGCAGCGGCAAGGAGCTGGTCGCCCGCATGATTCACCTGCAAGGCCCCAGAAGTGA
CGGCCCCTTTATCGCAGTGAACTGTGGCGCAATCCCCTCGGAATTGATGGAAAGCGAGTTCTTTGGCCACAAGAAGGGCA
GCTTCACCGGAGCCGTCGAGAACAAGCAGGGCCTGTTCCGCTCTGCCGATGGTGGCACCCTGTTTCTGGACGAAGTGGCC
GACCTCCCACTGGCCATGCAGGTAAAACTGCTGCGTGCTATCCAGGAGAAAGCCGTCCGCCCGGTCGGCGATACCAAAGA
AGTGCCGGTGGACATCCGGGTGCTCAGCGCCACCCACAAAAACCTCCCGGAACTGGTGCAGGAAGGCGACTTCCGCCAGG
ATCTGTTCTACCGGATCAACGTCATCGAACTGGCCGTTCCGCCGCTGCGCGAGCGCGCCGAGGATATTCCCTTGCTGGCC
GAGCACATTCTCCAACGCATAGCGCGGGAATACGAATGCGACCCGGCTAAGCTCACCCCGGCCGCCATCCAGCGCCTGCA
GGGTTACGAGTTCCCGGGCAACGTGCGGGAACTGGAGAATATCCTGGAGCGGGCTTTTACACTGTGCGACGAAGACCTGA
TAGACGCCAGCGACCTGCACCTTGGAGGCGGTGCCTGCCTGCCAGCCCGGGCTGCAACGGAGCCAACGCTGCCTGATCAG
ACATCAGAAGCGCAGCAACCCATCGCTGTGCCGGAAGGCGAAATTGATCTGGAATATTACCTGGAGGGCCTGGAGCGGCA
AGCCATTGAAAAGGCGCTCGAGGCAACCCGCTGGAACAAAACCGCAGCGGCCAAGCGCCTGGGAATCAGCTTTCGGGCAT
TGCGGTACCGGTTGAAGAAGTTGGGAATGGAGTAG

Protein sequence :
MTTQTALIVDDEPDIRDLLEITLTRMGITTYTAPDLASARELLQQHNPQLCLTDMNLPDGNGIDLVHWIQQHTPCTPVAV
ITAYGSMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLSEPQTGETAESDEPGLLLGDSPQIRKLRTQTKKLARSQA
PVFISGESGSGKELVARMIHLQGPRSDGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKQGLFRSADGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGDFRQDLFYRINVIELAVPPLRERAEDIPLLA
EHILQRIAREYECDPAKLTPAAIQRLQGYEFPGNVRELENILERAFTLCDEDLIDASDLHLGGGACLPARAATEPTLPDQ
TSEAQQPIAVPEGEIDLEYYLEGLERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 4e-116 54
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 4e-116 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Maqu_0874 YP_958157.1 two component, sigma54 specific, Fis family transcriptional regulator BAC0089 Protein 2e-71 44
Maqu_0874 YP_958157.1 two component, sigma54 specific, Fis family transcriptional regulator BAC0467 Protein 8e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Maqu_0874 YP_958157.1 two component, sigma54 specific, Fis family transcriptional regulator VFG1214 Protein 2e-141 64
Maqu_0874 YP_958157.1 two component, sigma54 specific, Fis family transcriptional regulator VFG1248 Protein 7e-58 43
Maqu_0874 YP_958157.1 two component, sigma54 specific, Fis family transcriptional regulator VFG0116 Protein 7e-62 41