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Name : Maqu_3386 (Maqu_3386) Accession : YP_960644.1 Strain : Marinobacter aquaeolei VT8 Genome accession: NC_008740 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 3743900 - 3747058 bp Length : 3159 bp Strand : + Note : KEGG: noc:Noc_1804 type I site-specific deoxyribonuclease HsdR; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like DNA sequence : GTGACTGAGGATCAGCTGGAACAACAATGCCTGCAATGGTTCGCCGAAGGCGGCTGGGAGATCGCCCACGGGCCCGATCT GGCATCGGACGGAGAGGCCCCGGAACGGGCCGATTACCGGCAGGTCTTGTTGCTGGCGGATCTTGAGGCAGCGATACAGC GCATCAACCCTCACCTGCCCCAAAGCGCTGTTGAACAAGCCGTGGCCGTGGTGCGCAAACCCGAAAGCCTGGACGTGGTG ATCAGCAACCGGGCCTTTCACCGCCTGCTGCTGGACGGTGTGCCGGTGGAGTACAAGCGCGACGACAAGGTGGTTCACGA CCAGGCCTTTCTAGTGGATTTTGGTGACCTCACCGCCAACCGGTTCCGGGCCATTAACCAGTTCACCATTGAGGGCTCCA AACAGCTCCGCCGGCCGGATGTGATTTGCTTTATCAACGGCCTGCCACTGGCCGTGCTGGAGCTGAAAAGCCCGGGCGCA GAGAACGTGAACATCTGGGATGCCTACAACCAGGTCCAGACCTATAAAGATGAATGCTCCGATCTTTTTGCCTACAACGA AGCCGCCGTTATCAGCGATGGCTATCTGGCCCGGGTTGGCTCCCTCACCGCCAGCCAGGAGCGCTACATGCCCTGGCGCA CCCTCAGGCACGAGGATGACAAGCCGTTGCTGGAATGGCAGCTGGAAACCATGGTGCGGGGCTTCTTCGACCGGGAGCTG TTCCTGGATTACATCCGCTATTTTGTGATCTTCGAGACGGATTCCGACAAGCTGATCAAGAAGATTGCCGGATACCACCA GTTCCATGCGGTGTGTGAAGCGGTAAAGGCCACGGTGATTGCCGCCCAGGCACCGGAGCACGGGCATTGGGCCAAGGAGA AGCGCGCCACCTACGGCGATGAGGTTTTGCCCGGCAGCAAGAAAGCCGGCGTGGTATGGCACACCCAGGGCTCCGGCAAG AGCATTTCCATGTGCTGTTACGCCGGCAAGCTGCTGCAACAGCCGGAGATGAACAACCCCACGCTGATTGTGGTCACCGA CCGCAACGACCTGGACGGCCAGTTGTTTGCCACCTTCAGCGCCGTCCGGGAATTGCTGAAGCAGGAACCGGTGCAGGCCG ATGACCGCGACACCCTGCGTCGGCTGCTGTCGGAACGGGAATCCGGCGGCATCATCTTCACCACGGTTCAGAAGTTCGCC CTGCTCAACGATGAGTCCGGCCACCCGATTCTGAACGACCGCCACAACATCGTGGTGATCTCAGACGAAGCCCACCGCAG CCAGTACGGCCTGAAAGCCACCCTCAAGAAGGACGGCACCTACAAGTTCGGCTACGCCCGCCACATGCGCGATGCCCTGC CCAATGCCTCGTTCATCGGCTTTACCGGCACCCCCATCGAGAGCGAAGACAAAGACACCCGGGCCGTGTTCGGCGATTAC GTGTCGATCTACGACATCCAGGATGCCGTGGACGATGGTGCGACCGTGCCCATCTTCTACGAATCCCGCCTGGCCAAACT CGACATCAACCGCGAACAGATCGAGGAATTGTCGGATCAGGTGGAGGAAGTGGTTGAAGACGACGAAGACGTTGGCAGCC GCGAGAAAACCAAGGGCGAGTGGAGCCGGCTGGAGAAGCTGGTCGGCGCCGGCCCGCGCCTGAAGCAGGTGGCGGAAGAC CTGGTAAACCACTTTGAAACCCGCTCCAGCACCATAGACGGCAAGGCCATGATTGTGGCCATGAGCCGGGAGATTGCGGT TCACCTGTATAACGAGATTGTCGCCCTGCGCCCGGAATGGCACGACGATGATCCCGAGAAAGGCGCCATCAAGATCGTGA TGACCGGCTCCGCCTCTGATCGCGCGCTGCTGCAGCCGCACATCCACAACAAGCAGACCAAGAAACGGTTCGAGAAGCGC TTCAAAGACATCAACGACCCGCTCAGGCTGGTGATCGTGCGGGATATGTGGCTGACCGGCTTCGATGCGCCCTGCTGTCA CACCATGTATGTGGACAAGCCCATGAAGGGCCACAACCTGATGCAGGCCATTGCCCGCGTAAACCGCGTGTTCAAGGACA AGCCCGGCGGGCTGGTGGTGGATTACATCGGCATCGCCAACGAGCTCAAGCAGGCCCTGAAAACCTACACCGACGCTAAG GGCAAGGGCTCACCTACCCATAGCGCAGAAGAAGCCTACGCCATCCTGCTGGAGAAGCTGGACATCATCCACGGCATGTT TGCCCCCGGCCCCAAAGGTAAGGGCTTCAGCTATAGCGGTTTTGACACCGAGCCCCGCAAGGTTCTGCTGGCCACCGCGA ACTATGTGCTCAGCCTGGAAGACGGCAAAAAGCGCTTCTTGGATACCGTGCTGGCCATGAACAAAGCCTTCTCCCTGTGC GCCACCCTGGACGAAGCCCAAACGCTTCAGAAGGAGGTGGCGTTCCTGTCGCAGGTGAAGACGGCCATCACCAAGTTCAC CAGCGTAGACAAGAAGCTGACTGAGGAAGAGAAGAACACGGCGCTGCGGCAGATCCTGAACAACGCTCTCATCGCCGAAG GGGTTACCGATGTCTTCGCCCTGTGCGGCCTGGACAAGCCCAACATCGGCCTGCTCTCTGACGAGTTCCTGGAAGACGTT CGGCAAATGCCCTACAAGAACTTCGCCGTGGAACTCCTGGAGAAGCTGCTCAAGGACGACATCAAGGCCAAGACCCGCAA CAACGTAGTACAGGAGAAGAAGTACGCCGACCGCCTGCAGGAGACGCTGCGCAAGTACAACAACCGGGGCATCGAGACAG CCCAGGTGATCGAAGAGCTGATCGCCATGGCCAAGCAGTTCCAGGCTGAAATGGAGCGGGATGCCGCCCTCGGTCTGAAC CCGGACGAAGTGGCCTTCTACGACGCCCTGGCCAGCAATGAAAGCGCCGTGCGGGAGCTGGGCGACGAGATCCTGAAGAA GATCGCCGTGGAGATCACCGACAAGCTGCGCAAATCCACCACCGTGGACTGGCAGGTACGGGAGAGCGTGCGGGCCAAGC TTAGGATTCTGGTGCGGCGGACGTTGCAGCGGTACAAGTACCCGCCAGACAAGGCGCCAGCGGCGATTGAGTTGATTATG GAGCAGGCGGAAGCCTTATCTAACCACTGGACAAGGTGA Protein sequence : MTEDQLEQQCLQWFAEGGWEIAHGPDLASDGEAPERADYRQVLLLADLEAAIQRINPHLPQSAVEQAVAVVRKPESLDVV ISNRAFHRLLLDGVPVEYKRDDKVVHDQAFLVDFGDLTANRFRAINQFTIEGSKQLRRPDVICFINGLPLAVLELKSPGA ENVNIWDAYNQVQTYKDECSDLFAYNEAAVISDGYLARVGSLTASQERYMPWRTLRHEDDKPLLEWQLETMVRGFFDREL FLDYIRYFVIFETDSDKLIKKIAGYHQFHAVCEAVKATVIAAQAPEHGHWAKEKRATYGDEVLPGSKKAGVVWHTQGSGK SISMCCYAGKLLQQPEMNNPTLIVVTDRNDLDGQLFATFSAVRELLKQEPVQADDRDTLRRLLSERESGGIIFTTVQKFA LLNDESGHPILNDRHNIVVISDEAHRSQYGLKATLKKDGTYKFGYARHMRDALPNASFIGFTGTPIESEDKDTRAVFGDY VSIYDIQDAVDDGATVPIFYESRLAKLDINREQIEELSDQVEEVVEDDEDVGSREKTKGEWSRLEKLVGAGPRLKQVAED LVNHFETRSSTIDGKAMIVAMSREIAVHLYNEIVALRPEWHDDDPEKGAIKIVMTGSASDRALLQPHIHNKQTKKRFEKR FKDINDPLRLVIVRDMWLTGFDAPCCHTMYVDKPMKGHNLMQAIARVNRVFKDKPGGLVVDYIGIANELKQALKTYTDAK GKGSPTHSAEEAYAILLEKLDIIHGMFAPGPKGKGFSYSGFDTEPRKVLLATANYVLSLEDGKKRFLDTVLAMNKAFSLC ATLDEAQTLQKEVAFLSQVKTAITKFTSVDKKLTEEEKNTALRQILNNALIAEGVTDVFALCGLDKPNIGLLSDEFLEDV RQMPYKNFAVELLEKLLKDDIKAKTRNNVVQEKKYADRLQETLRKYNNRGIETAQVIEELIAMAKQFQAEMERDAALGLN PDEVAFYDALASNESAVRELGDEILKKIAVEITDKLRKSTTVDWQVRESVRAKLRILVRRTLQRYKYPPDKAPAAIELIM EQAEALSNHWTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 71 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 44 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 44 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 44 |
