Gene Information

Name : rdgC (Maqu_2501)
Accession : YP_959763.1
Strain : Marinobacter aquaeolei VT8
Genome accession: NC_008740
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 2796066 - 2796992 bp
Length : 927 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTCGTAATGCCCGTGTTTTCCGTTTCACCAAACCTTTCGATATTTCCGCAGAAGCGCTGGAAGAGAAACTCCA
GGCGGACGCATTCAAACCCTGTGGTCCTCAGGAAACCAATCGCCAGGGCTGGGTTCCGCCCCTGGGTAAGCATGGCGACC
AACTGGTGCACAGCGCCAACGGTTATCACCTGATTGCCCTGAGAAAAGAAGAGAAGATCCTGCCCGGGCCAGTGGTGAAG
GAGGCTGTGGAAGAGCGTGCCGAAGCCATTGAGCTGGAGCAGGGCCGAAAGGTGCGCCGGAAGGAAAAAGACGAACTGAA
AGAACAGGTGATGCTGGAAATGCTGCCCCAGGCGTTTTCACGCAACCGCCGATGCTTTGCTTACCTGGCCCCTCAGGACG
GCGTGCTGGTGGTTGATGCCGGCTCCGCGAAACAGGCCGAAGACCTTGCCTCCACCCTGCGCAAAAGCCTGGGATCACTG
CCTGTGCGCCCGCCTGCGGTTGAGCAATCCCCCGCCTTCACCCTCACCGGCTGGCTGAACGAAAGCATTGATCACCCGGC
CAATATTACGCTGGGCAGCGAATGCGAACTGAAAGACCCGTCAGAAGATGGCGGCGTGGTACGCTGCAAAGGCCTCGATC
TCAAAGCCGACGAGATCCGCAACCACCTGGAAGCCGGAATGCAGGTGACCAAGCTGGCCCTGACCTGGGACGACAATGTC
TCGTTCGTGCTGGATGAAGAGCTGGGCATACGCCGGCTGAAATTCGGTGAAACCCTGCAAGAGCAGCTGGACGACGTCGA
TGTCGACGACGCCCTGGCCAAGTTTGATGCAGCTTTCACCATCATGACTCTGGAGCTGTCACGGCTGATTCCCGGGCTGC
TGGAAGCCCTGGGCGGAGAAGATCGCTCCGCCATCGTCGAGGAGTAA

Protein sequence :
MWFRNARVFRFTKPFDISAEALEEKLQADAFKPCGPQETNRQGWVPPLGKHGDQLVHSANGYHLIALRKEEKILPGPVVK
EAVEERAEAIELEQGRKVRRKEKDELKEQVMLEMLPQAFSRNRRCFAYLAPQDGVLVVDAGSAKQAEDLASTLRKSLGSL
PVRPPAVEQSPAFTLTGWLNESIDHPANITLGSECELKDPSEDGGVVRCKGLDLKADEIRNHLEAGMQVTKLALTWDDNV
SFVLDEELGIRRLKFGETLQEQLDDVDVDDALAKFDAAFTIMTLELSRLIPGLLEALGGEDRSAIVEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 3e-48 42