Gene Information

Name : Mvan_3371 (Mvan_3371)
Accession : YP_954174.1
Strain : Mycobacterium vanbaalenii PYR-1
Genome accession: NC_008726
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 3587822 - 3588745 bp
Length : 924 bp
Strand : -
Note : PFAM: periplasmic solute binding protein; KEGG: nfa:nfa24340 putative ABC transporter substrate-binding protein

DNA sequence : 
GTGAGGCGAGGCGTACGGCGGGTCCGGCAGGTGCTGGCGGTGGCGGGCATCGCAGCAGTGGTGGGGGCGTGCGCGTCCGC
CGAACGCGGCGAAGCGGACCGGCCGGTTGTGCTGACCACCTTCACCGTGCTGGCCGATATCGCGGCGAATGTGGCAGGCG
AGCACCTGGTCGTCGAGTCGATCACCAAGCCCGGAGCCGAAATCCACGGTTACGAGCCCACGCCGGGCGACATCAGGAAG
GCCGCGCAGGCGGATCTCATCCTGGACAACGGGCTCAACCTGGAAGCCTGGTTCGCCCGGTTCGTCGACGGGATCGACGT
GCCGCACGTCATGGTCAGCGACGGGATCGTCCCGCTCGACATCAGCGCGGATGCGTATGCGGGACTGCCCAATCCGCATG
CGTGGATGTCACCGCTGAACGTGCAGATCTACGCCGACAACATGGCTACCGCGTTCAGTGAGCTGGATCCCGGCAATGCC
GCCGACTACGCGGCGAACGCCGCCGAATACCGCAGGGAGCTCCAGCAGATCCATGACGATCTTCTCGCCCGACTCGACGC
CGTGCCCGCCGCCCAGCGCGCTTTGGTGACCTGTGAAGGGGCCTTCTCCTACCTCGCGCGCGACACCGGCCTGACCGAGA
AGTACATCTGGCCGGTCAACGCCGAGCAGCAGGCCACCCCACAACAGATCGCCTCGACCATCGAGTTCGTCGACGCCAAC
GACGTGCCCGCGGTGTTCTGCGAATCGACGGTGTCGGATGCGCCGATGCAACGGGTCGTCGAAGCCACCGGGGCCCGCTT
GGGCGGGGTGCTGTTCGTCGACTCGCTCTCCGAGGCCGACGGTCCGGTGCCGACATATCTGGAGCTGATCCGACACGACG
CAGAAACGATCACGGCTGCCCTGACCGGCAACCCGAAATCGTGA

Protein sequence : 
MRRGVRRVRQVLAVAGIAAVVGACASAERGEADRPVVLTTFTVLADIAANVAGEHLVVESITKPGAEIHGYEPTPGDIRK
AAQADLILDNGLNLEAWFARFVDGIDVPHVMVSDGIVPLDISADAYAGLPNPHAWMSPLNVQIYADNMATAFSELDPGNA
ADYAANAAEYRRELQQIHDDLLARLDAVPAAQRALVTCEGAFSYLARDTGLTEKYIWPVNAEQQATPQQIASTIEFVDAN
DVPAVFCESTVSDAPMQRVVEATGARLGGVLFVDSLSEADGPVPTYLELIRHDAETITAALTGNPKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 4e-65 56
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-65 56
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 5e-65 56
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 5e-65 56
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 5e-65 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mvan_3371 YP_954174.1 periplasmic solute binding protein BAC0349 Protein 2e-65 56
Mvan_3371 YP_954174.1 periplasmic solute binding protein BAC0439 Protein 8e-63 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mvan_3371 YP_954174.1 periplasmic solute binding protein VFG0525 Protein 2e-65 56