Gene Information

Name : Mvan_3369 (Mvan_3369)
Accession : YP_954172.1
Strain : Mycobacterium vanbaalenii PYR-1
Genome accession: NC_008726
Putative virulence/resistance : Virulence
Product : ABC-3 protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 3586228 - 3587097 bp
Length : 870 bp
Strand : -
Note : PFAM: transport system permease protein; ABC-3 protein; KEGG: nfa:nfa24360 putative ABC transporter membrane protein

DNA sequence : 
ATGAGCGTCCTGGAGTTCCTCATCGAGCCGATGCGGCTGGACTTCATGGTTCGGGCCACCGCCACCACACTGGTCGCCTC
GGTCGTGTGCGCCACCCTGTCCTGCTGGCTGGTCCTGATCGGCTGGTCTCTGATGGGCGACGCCGTCTCACACGCGGTGC
TGCCGGGAGTGGTGTTGGCCTACATCGTCGGCGCCCCGTTCGCGCTCGGCGCGGTCATCTTCGGATTCGCCGCCGTCGCT
CTCATCGGAATCGTGCGCGGCACCAGCCGAATCAAGGAGGACGCTGCGATCGGCGTCGTCTTCACCACGCTGTTCGCCCT
TGGCCTGGTACTGATTTCGGTCACCCCCAGTCAGGTCGACCTCAACCACATCATCTTCGGCAACCTGCTCGGGGTGTCCC
GCGCGGACCTGACGCAGGTCGTCGTGCTCGGCGCGGTCGTCCTGGCCGTGCTCGTCTTCAAACGCCGCGACTTCACGCTC
TACGCCTTCGATGCCACCCACGCCCACGCGATCGGGCTCAACCCGCGACTCCTCGGCGCCACCCTGCTCGGACTGCTCGC
CCTGACGGCGGTCGTCGCCCTGCAGGCCGTCGGCGTCGTCCTCGTCGTCGCCCTGCTGATCACCCCCGGCGCCACCGCGT
ATCTGTTGACCGATCGATTCCAGCGGATGCTGCTGATCGCGCCCGCCACCGCAGTGTTCGCCGGGCTCGTCGGGATCTAC
GTCAGCTACTACGCCGATACCGCGTCGGGACCGATGATCGTGCTCGCCAACGGCGTGATCTTCACTCTCGTATACCTGTT
GAGTCCCCGTCACGGGCTCGTCACCGCGTGGATTCAGAAGAAGACACACGCGAAGAGCGCCGGCAACTGA

Protein sequence : 
MSVLEFLIEPMRLDFMVRATATTLVASVVCATLSCWLVLIGWSLMGDAVSHAVLPGVVLAYIVGAPFALGAVIFGFAAVA
LIGIVRGTSRIKEDAAIGVVFTTLFALGLVLISVTPSQVDLNHIIFGNLLGVSRADLTQVVVLGAVVLAVLVFKRRDFTL
YAFDATHAHAIGLNPRLLGATLLGLLALTAVVALQAVGVVLVVALLITPGATAYLLTDRFQRMLLIAPATAVFAGLVGIY
VSYYADTASGPMIVLANGVIFTLVYLLSPRHGLVTAWIQKKTHAKSAGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-39 44
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 8e-39 44
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-38 44
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-39 44
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-39 44
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 8e-37 41
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 8e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mvan_3369 YP_954172.1 ABC-3 protein BAC0442 Protein 3e-40 49
Mvan_3369 YP_954172.1 ABC-3 protein BAC0352 Protein 5e-39 44
Mvan_3369 YP_954172.1 ABC-3 protein BAC0441 Protein 1e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mvan_3369 YP_954172.1 ABC-3 protein VFG0528 Protein 4e-39 44