Gene Information

Name : Mvan_1004 (Mvan_1004)
Accession : YP_951848.1
Strain : Mycobacterium vanbaalenii PYR-1
Genome accession: NC_008726
Putative virulence/resistance : Resistance
Product : ABC transporter--like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1049639 - 1050331 bp
Length : 693 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa42490 putative ABC transporter ATP-binding protein

DNA sequence : 
ATGCTCGAGATGACCGACGTCACCAAGACCTACCGCGTGGGTGGTCAGACCGTGCGCGCACTCGACGGGATCACCCTGTC
GTTGTGCGGTGGGGAGTTCGTGTCCGTCGTCGGCCCGTCGGGTGCCGGCAAGAGCACACTGCTGCACCTGCTCGGTGCGC
TGGACCGGCCGGACGCCGGGTCGATCCGGTTCCAGGGCGCGGAGATCGCCGCCCTCGACGACGAGGCCCAGTCCGAATTC
CGCAGACACAGCGTGGGATTCGTGTTCCAGTTCTTCAACCTGTTGCCGACGATGACGGCGTGGGAGAACGTCGCGGTGCC
CAAGCTGCTCGACGGGTCCCGGATGGCGAAGGTCAAGTCACGCGCGCTGGATCTGCTCGCGGTCGTCGGACTCGGTGATC
GCGCGGAGCACCGGCCCTCGGAGCTGTCCGGAGGGCAGATGCAGCGGGTGGCGGTGGCCCGCGCCCTGATGATGGACCCA
CCGCTGATCCTCGCCGACGAGCCCACGGGCAACCTCGACACCAAGACGGGTGCGGCCATCATGGCGCTGCTCACCGACAT
CGCCCACCAGGACGAACGATCAGTTGTCATGGTGACGCACAACCTCGGCGCGGCATCGGCCACCGACCGGGTGATCACCC
TGACCGACGGCCGCATCGGCTCCGACGTGTTGGCCGGTGGCGAGCTGACATGA

Protein sequence : 
MLEMTDVTKTYRVGGQTVRALDGITLSLCGGEFVSVVGPSGAGKSTLLHLLGALDRPDAGSIRFQGAEIAALDDEAQSEF
RRHSVGFVFQFFNLLPTMTAWENVAVPKLLDGSRMAKVKSRALDLLAVVGLGDRAEHRPSELSGGQMQRVAVARALMMDP
PLILADEPTGNLDTKTGAAIMALLTDIAHQDERSVVMVTHNLGAASATDRVITLTDGRIGSDVLAGGELT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mvan_1004 YP_951848.1 ABC transporter--like protein CP001581.1.gene798.p Protein 4e-45 45
Mvan_1004 YP_951848.1 ABC transporter--like protein NC_012469.1.7686878. Protein 6e-45 45
Mvan_1004 YP_951848.1 ABC transporter--like protein NC_008702.1.4606598. Protein 1e-39 45
Mvan_1004 YP_951848.1 ABC transporter--like protein CP001581.1.gene598.p Protein 3e-44 44