Gene Information

Name : AAur_pTC10211 (AAur_pTC10211)
Accession : YP_950083.1
Strain :
Genome accession: NC_008712
Putative virulence/resistance : Unknown
Product : IS5 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 224829 - 225698 bp
Length : 870 bp
Strand : +
Note : identified by match to protein family HMM PF01609

DNA sequence :
GTGTCGCTGATCGAGCCCTATGCACCGCAGTCCGGCCACCGCGGCCAGCAGCCCTTCGCGGTAGAGGCGATGCTGCGCAT
CCACTTCATGCAGCAGTGGTTCAATCTCAGTGATCCGGCGATGGAAGAGGCGCTGCACGACGTGCCGGTGTTCCGTGACT
TCGCGGGCCTGTCCAACTGGGCCGATGCCATGCCCAGCGAATCCAGCATCCTGCGCTTTCGCCATCTGCTGGAGCGCCAC
AAGCTGGCCGATCAGATCCTTGCCACGGTCAATGGGTTGCTCAGCGCCAAGGGGCTGCTGCTCAAGGCCGGCACGGTGGT
GGACGCCACGCTGATCGCGGCTCCCAGTTCGACGAAGAACCGTGAGGGAGAGCGAGACCCCGAGATGCACCAGAGCAAGA
AAGGACAGCAGTGGTATTTTGGGATGAAGGCGCACATCGGCGTGGATGCCGAGTCCGGTCTGGTGCACACGGTGCAAGGA
ACGTCGGGCAACGTCAATGACGTCGTCGAGGCCAACAGCCTGCTGCACGGCGAAGAGACGGTGGTGTTTACCGATGCCGG
CTACCAAGGAGCGGACAAGCGTCCTGATGCCAAGCCTGGTGTGACGTGGCATGTGGCAATGCGCCCGGGCAAGCGGCGCG
CACTGGACACGGAGCACAACGAAGCCGATGCCTTGCTTGAGAAGATCGAGCGGATCAAGGCGGGTGTGCGCGCGAAGGTG
GAGCACCCGTTTCGGGTGATCAAGCGCCAGTTCGGACACGTGAAGGTGCGCTACCGGGGATTGAAGAAGAACACGGCGCA
GTTGAAGACGCTGTTCGCGCTGTCCAACCTGTGGATGGTGAGGAACAAGGTCGGGAGCTTGGTGGGATGA

Protein sequence :
MSLIEPYAPQSGHRGQQPFAVEAMLRIHFMQQWFNLSDPAMEEALHDVPVFRDFAGLSNWADAMPSESSILRFRHLLERH
KLADQILATVNGLLSAKGLLLKAGTVVDATLIAAPSSTKNREGERDPEMHQSKKGQQWYFGMKAHIGVDAESGLVHTVQG
TSGNVNDVVEANSLLHGEETVVFTDAGYQGADKRPDAKPGVTWHVAMRPGKRRALDTEHNEADALLEKIERIKAGVRAKV
EHPFRVIKRQFGHVKVRYRGLKKNTAQLKTLFALSNLWMVRNKVGSLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 2e-72 60
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 4e-67 59
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 6e-67 59
unnamed AAO33449.1 putative transposase Not tested Not named Protein 2e-57 55
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 3e-60 50
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 3e-60 50