Gene Information

Name : AAur_pTC10139 (AAur_pTC10139)
Accession : YP_950011.1
Strain :
Genome accession: NC_008712
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.4
Position : 161504 - 163660 bp
Length : 2157 bp
Strand : +
Note : identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525

DNA sequence :
ATGAACCGCACACCGGAAGACCATCACCACCAGCACCTGCCAGAGGACATCCCCGGCCGCGCCCCGGTTGCCGAGGAGGA
GCACGCAGACCACGAGACGCACGGCCAGGCCATGCCTGAAGGCCATGCCCATTCCGCCGTGGACGAGGAACACGCCGTCC
ACGAGCATGGCCAGCATGCTGGACACAGCACGGCCATGTTCAAGAACAAGTTCTGGCTCAGCCTGGCGCTGTCCGTTCCG
GTGGTCTATTTCAGCCCGATGTTCGCCCACCTGCTCGGCTATCACATCCCGGAATTCCCGGGATCCCTCTGGATCCCGCC
GGTCCTGGGATCGGTGATCTTCTTCTACGGTGGTACACCGTTCCTCAAGGGCGGCTGGACGGAGCTGCGCAGCCGGCAGC
CGGGCATGATGCTGCTCATCGCGATGGCCATCACCGTCGCCTTCGTCGCATCCTGGATCACCACACTGGGCATCGGCAAC
TTCAATCTGGACTTCTGGTGGGAGCTGGCCCTGCTCGTAGTCATCATGCTGCTGGGCCACTGGATCGAAATGCGGGCCCT
TGGTTCGGCACGCGGCGCCCTGGATGCACTCGCCGAATTGCTGCCCGATGAAGCCGAACGCATCACCGAACACGGCACGG
AAACGGTCAGCATCAGCGAGCTCTCCGTCAACGACGTCGTCCTGGTCCGCTCCGGTGCGCGGCTGCCCGCCGACGGCGAA
ATCATCGAAGGCCGGGCCGAACTCGACGAATCAATGATCACGGGTGAGTCCAAAACCGTACCGCGTGGCCCCGGCGATAC
CGTGGTGGCCGGAACAGTGGCAACCGACAGTGCAGTGCGCATCAGAGTAGGCGCGGTCGGCACCGACACCGCCCTGGCCG
GCATTCAACGGCTGGTCGCCGAAGCACAAGCGTCCTCCTCCAAAGCGCAGGCTCTGGCAGATAAGGCTGCGGCGTTCCTG
TTCTACTTCGCCCTCGGCGCCGGCATCATCACCTTCATCGCCTGGGTACTCCTGGGCAGCCCCGACGAGGCCGTGATCCG
TACGGTGACCGTCCTGGTCATCGCTTGCCCGCACGCCCTCGGCCTGGCGATCCCGCTGGTCATCGCCATCTCCACGGAAC
AAGCTGCCCGTGCCGGAGTCCTGATCAAGAACCGCATCGCGCTCGAGCGCATGCGCACTATCGACGTCGTACTCTTCGAC
AAGACCGGAACCCTGACCAAGGGACAGCCCGGCCTGACAGGCGTCGCGGCAATCGAGGAAATGAACGACGACGACGTTCT
GGCGCTGGCCGCGGCCGTGGAAGCGGACAGTGAACATCCCTCCGCCCGGGCAATCGTCACCGCAGCCCGGGAACGCGGTC
TCCGTGTACCGGCTGCCAGCGGCTTCGCCTCGCTGACCGGCCGCGGCGTCAAGGCCGACATCGGCGCCTCGGCCGTCATG
GTCGGCGGACCGAACCTGATCGCGGCCGAAGGCCTGGGCGTCCCATCGGAATTACGGGAACAAACCCGTCCCTGGGTCGA
ACGCGGCGCTTCCGTACTTCATGTGATCCGCGCAGGAGAGGTCATCGGGGCGGTCAGCTTGGAGGACGAGGTCCGCGAGG
AATCCCGCCAGGCGATCACCGCCCTGCAAAAGCGCGGCATCCGGGTCGCCATGATCACCGGTGACGCGCACCAAGTCGCC
AACGCCGTGGCAGCTGAGCTGAATATCGACGAGGTCTTCGCCCAGGTCCTGCCGCAGGACAAGGACAAGAAAGTCGGCGA
ACTGCAGTCCCGCGGCCTGAAGGTTGCCATGGTCGGCGATGGCGTGAACGATTCCCCTGCCCTCGCCCGGGCCGAGGTCG
GCATCGCCATTGGAGCGGGAACGGACGTGGCGATGGAATCGGCCGGCGTGGTCCTGGCCGGCAACGATCCGCGGGCCGTT
TTGTCCATGGTGGATCTGTCCCGGGCCAGCTACCGCAAGATGATCCAGAACCTCGTCTGGGCTACCGGTTACAACGTCAT
CGCCGTTCCCCTGGCCGCCGGCGTGCTGGCCTTTGCCGGCGTCGCAATCTCCCCCGCAGTAGCAGCGGTGCTGATGTCGG
TCTCCACCATCGTCGTGGCCCTGAACGCCCAGCTGCTGCGCCGCATCAAGCTCGACCCGGCCGCCGTCCACTACTAG

Protein sequence :
MNRTPEDHHHQHLPEDIPGRAPVAEEEHADHETHGQAMPEGHAHSAVDEEHAVHEHGQHAGHSTAMFKNKFWLSLALSVP
VVYFSPMFAHLLGYHIPEFPGSLWIPPVLGSVIFFYGGTPFLKGGWTELRSRQPGMMLLIAMAITVAFVASWITTLGIGN
FNLDFWWELALLVVIMLLGHWIEMRALGSARGALDALAELLPDEAERITEHGTETVSISELSVNDVVLVRSGARLPADGE
IIEGRAELDESMITGESKTVPRGPGDTVVAGTVATDSAVRIRVGAVGTDTALAGIQRLVAEAQASSSKAQALADKAAAFL
FYFALGAGIITFIAWVLLGSPDEAVIRTVTVLVIACPHALGLAIPLVIAISTEQAARAGVLIKNRIALERMRTIDVVLFD
KTGTLTKGQPGLTGVAAIEEMNDDDVLALAAAVEADSEHPSARAIVTAARERGLRVPAASGFASLTGRGVKADIGASAVM
VGGPNLIAAEGLGVPSELREQTRPWVERGASVLHVIRAGEVIGAVSLEDEVREESRQAITALQKRGIRVAMITGDAHQVA
NAVAAELNIDEVFAQVLPQDKDKKVGELQSRGLKVAMVGDGVNDSPALARAEVGIAIGAGTDVAMESAGVVLAGNDPRAV
LSMVDLSRASYRKMIQNLVWATGYNVIAVPLAAGVLAFAGVAISPAVAAVLMSVSTIVVALNAQLLRRIKLDPAAVHY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 4e-72 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AAur_pTC10139 YP_950011.1 copper-translocating P-type ATPase BAC0629 Protein 1e-116 47
AAur_pTC10139 YP_950011.1 copper-translocating P-type ATPase BAC0079 Protein 1e-110 43
AAur_pTC10139 YP_950011.1 copper-translocating P-type ATPase BAC0101 Protein 9e-77 41