Gene Information

Name : fepD (AAur_0559)
Accession : YP_946367.1
Strain : Arthrobacter aurescens TC1
Genome accession: NC_008711
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 573978 - 575105 bp
Length : 1128 bp
Strand : -
Note : identified by match to protein family HMM PF01032

DNA sequence :
ATGGTCCCCTGTTGTGTCCCCACTGACGGCGTTATGTCCCAACTGACCGCCCCCGCGCCCAAGCCGCGCCACGGCGGGCC
AGCCACCGTCGCCCTCCCGGCCAACAGCGCGGCCCCACGTTCCGGCGTCGTCAATAAGTCCCGCTGGCGGATCCTCTTCC
TGGTCCTTGCCGCGGCAGTCCTCTTGGGCGCCGCGATCCTAAGTCTGGGCGTGGGAGCCAAATTCATCCCGGCGTCAACA
GTCCTTGAAGCGTTCACCAACCCCCAGGACACGGCGGATCACGCCATCATCCTTCAGAATCGGCTGCCGCGTACTCTGAT
GGGCATCGCCGTCGGGGTTGCCCTGGGCGTAGCCGGCGCGCTCATCCAAGCCATCACGCGGAATCCCCTGGCAGATCCCG
GCATCCTGGGCGTCAACGCGGGCGCTTCCTTTGCCATCGTGATCGCCATTGGCGTCTTTGGGATCGGCTCTCTCAGTGGC
TACATGTGGTTCGCCTTTATTGGCGCCATCCTGACCACTGCTGCCGTGTACGTGATTGGCACCTCCGGCAGGAACGTGGT
GAACCCTATCCGGCTGACGCTCGCGGGTGTTGCCTTGGGTGCGGTCCTCACAGGTATTGGCTCCGGACTCACCCTCCTGA
ACCCCAAGGCCTTCGATCACCTGCGCTCGTGGAGCATCGGCTCGTTGGACACACGGAGCATGGAGTCGGTGGTGACCGTG
GCGCCGTTCATGGGCGTGGGCTTGCTGGTGGCGCTGTTCTGCGTCCGCGGGCTCAATGCCGTGGCACTGGGCGACGACCT
CGCCACGTCCCTCGGCGCCAACGTCAACCGGACGCGCATCCTGGGCGTCGTGGCCATCACCCTCCTCAGCGGAGCCGCAA
CAGCCGGTGCCGGTGCAATTGGTTTTGTGGGGCTCATGATTCCGCACGTAGCCCGCTGGATCGTGGGACCGGACCAGCGC
TGGATCATGGCCACCACAGTGATCCTCTCCCCCATCCTGCTCCTGGTGTCGGATGTTGTGGGCAGGGTTGCCGCACCAGG
TGAGCTCCAGGTTGGCGTGGTGACGGCGTTCATCGGCGCGCCGGTGCTTATCACCTTGGCGCGGCGTCGGAAAGTGAGTG
GGCTGTGA

Protein sequence :
MVPCCVPTDGVMSQLTAPAPKPRHGGPATVALPANSAAPRSGVVNKSRWRILFLVLAAAVLLGAAILSLGVGAKFIPAST
VLEAFTNPQDTADHAIILQNRLPRTLMGIAVGVALGVAGALIQAITRNPLADPGILGVNAGASFAIVIAIGVFGIGSLSG
YMWFAFIGAILTTAAVYVIGTSGRNVVNPIRLTLAGVALGAVLTGIGSGLTLLNPKAFDHLRSWSIGSLDTRSMESVVTV
APFMGVGLLVALFCVRGLNAVALGDDLATSLGANVNRTRILGVVAITLLSGAATAGAGAIGFVGLMIPHVARWIVGPDQR
WIMATTVILSPILLLVSDVVGRVAAPGELQVGVVTAFIGAPVLITLARRRKVSGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-32 47
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-32 47
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-32 47
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-32 47
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 9e-29 41
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_946367.1 ferric enterobactin transport protein VFG0926 Protein 4e-41 53