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Name : dnaB (AAur_4139) Accession : YP_949806.1 Strain : Arthrobacter aurescens TC1 Genome accession: NC_008711 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 4521361 - 4522749 bp Length : 1389 bp Strand : - Note : identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665 DNA sequence : TTGTCAGTTACGCACTTGGACTCAATCGAGGGCTCACGCGCTTCGGACTCGAGCCGGAAACCTCCCCAGGACATCCCTGC TGAACAGTCAGTACTCGGCGGCATGATGCTCTCCAAGGACGCGATCGCCGATGTGGTTGAGATCGTTCGCGGGCACGACT TCTACCGGCCCGCACACGAGACCATCTATGAGTCCATCATCGATCTCTACGGCCGTGGCGAACCCGCCGACGCCGTTACC GTTTCGGATGAACTGACCAAGCGTGGCGAGATCAACCGGATCGGAGGCCCTGCCTACCTCCACGAGCTCATCCAAACAGT CCCTACTGCTGCCAACGCCGGTTACTACGCCGAGATTGTTGCGGAACGCGCAGTGCTGCGCCGCCTTGTCAACGCCGGAA CCAAAATTGTCCAGATGGGCTACGGCCAAGACGGCGAAGTGGAAGACCTCGTCAACCAGGCCCAGGCCGAGGTGTACGCG GTGGCTGAAAAGCGTACGGCGGAAGACTACGTGGCGTTGAAGGACGTCATGGAATCCACCGTGGATGAGATCGAGGCCTC CGGCCACCGCGGCGAGGGCATGACCGGCGTTCCCACCGGTTTCTACGAGCTGGACGAGCTGACGCACGGCCTGCACCCGG GCCAGATGATTGTCATCGCGGCACGCCCGGCCGTTGGTAAGTCCACCTTCGCATTGGACTTCGCGCGTTCGGCCGCCATC AAGAACAACCTGGCCACCGTCATGTTCTCTTTGGAAATGGGCCGGAACGAGATCGCCATGCGCCTTCTTTCCGCAGAAGC CACGATCGGTCTGCAGGACCTCCGTAAGGGCACCATCAAGGACGAGCAATGGTCCAAGATCGCCACCACCATGGGCCGCA TGAACGACGCTCCGCTGTTCATCGATGACAGCCCCAACATGTCCCTCATGGAGATCCGGGCCAAGTGCCGCCGCCTGAAG CAGCAGCACGACCTCAAACTCGTCATCCTCGACTACCTCCAGCTCATGAGCTCCGGCAAAAAGGTGGAATCCCGCCAGCA GGAAGTCTCCGAGTTCTCGCGTGCCCTCAAGCTACTGGCCAAGGAGTTGCAGGTTCCCGTCATCGCCCTGTCACAGCTGA ACCGTGGTTCCGAGCAGCGCCAGGACAAGCGCCCGATGGTTTCTGACCTCCGTGAATCCGGCTCCATCGAGCAGGACGCC GACATGGTGATCCTGTTGCACCGCGAAGACGTGTACGACAAAGAATCACCCCGCGCCGGCGAGGCCGACATCCTTATCGC CAAGCACCGTAACGGTCCAACCAAGGACATCGTTGTGGCGTTCCAGGGCCACTACTCGCGCTTTGCCAACATGGCGGGCG AAACGAGTGCTGGTGGCGGCGGCTTCTAG Protein sequence : MSVTHLDSIEGSRASDSSRKPPQDIPAEQSVLGGMMLSKDAIADVVEIVRGHDFYRPAHETIYESIIDLYGRGEPADAVT VSDELTKRGEINRIGGPAYLHELIQTVPTAANAGYYAEIVAERAVLRRLVNAGTKIVQMGYGQDGEVEDLVNQAQAEVYA VAEKRTAEDYVALKDVMESTVDEIEASGHRGEGMTGVPTGFYELDELTHGLHPGQMIVIAARPAVGKSTFALDFARSAAI KNNLATVMFSLEMGRNEIAMRLLSAEATIGLQDLRKGTIKDEQWSKIATTMGRMNDAPLFIDDSPNMSLMEIRAKCRRLK QQHDLKLVILDYLQLMSSGKKVESRQQEVSEFSRALKLLAKELQVPVIALSQLNRGSEQRQDKRPMVSDLRESGSIEQDA DMVILLHREDVYDKESPRAGEADILIAKHRNGPTKDIVVAFQGHYSRFANMAGETSAGGGGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-73 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-73 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-73 | 41 |
