Gene Information

Name : AAur_3854 (AAur_3854)
Accession : YP_949532.1
Strain : Arthrobacter aurescens TC1
Genome accession: NC_008711
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 4228692 - 4229450 bp
Length : 759 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGATTACCGTCCGGAACGTCACCAAGCGCTACGGCGGCACCACCGTACTGGACGATGTCAGCTGCGAGATTCCCCGTGG
CGGCATCACGTCCATCATCGGCCCCAACGGTGCGGGCAAATCCACACTGCTTTCGTTGGTCAGCCGCCTCCAGCCCATGG
ACGCCGGGAGAATTTCCGTAGCCGGGCTGGATGTGGCCGCGACACCCAGCAAAGAATTGGCCAAGACCATGGCCATCCTT
CGGCAGGAAAACCACCTGACCATGCGGCTCACGGTCCGCGACCTCGTGGCGTTTGGGCGCTTCCCGCACAGCGGCGGCCG
CCCGACGATCGAGGACTTGGAGCATGTGGACGAGGCCATCCGGCAGCTGGACCTCACATCCATGGCGGACAAGTTCGTGG
ACGAGCTCTCCGGCGGGCAGCGACAACGTGCCTATATTGCCATGGTCTTGGCGCAAGACACTGAATACCTGTTGCTCGAC
GAGCCGCTCAACAACCTGGACATGAAGCACTCAGTGGAAATGATGCGGCTGCTGCGGCGTTTGGCTGACGAACTCGGAAA
GACCGTTGTGCTGGTGGTCCACGACATTAACTTTGCGTCCTGCTACTCGGACACCATCCTGGCCATGAAGAACGGCAGGC
TCATCCACCAAGGCGCACCCTCGGACATCATGCGCGCCGGGATGCTGTACGACGTCTACGACATCGATATCCGCATCGAG
GAAATCGACGGCAACCGCATCGGCGTCTACTTCGCCTGA

Protein sequence : 
MITVRNVTKRYGGTTVLDDVSCEIPRGGITSIIGPNGAGKSTLLSLVSRLQPMDAGRISVAGLDVAATPSKELAKTMAIL
RQENHLTMRLTVRDLVAFGRFPHSGGRPTIEDLEHVDEAIRQLDLTSMADKFVDELSGGQRQRAYIAMVLAQDTEYLLLD
EPLNNLDMKHSVEMMRLLRRLADELGKTVVLVVHDINFASCYSDTILAMKNGRLIHQGAPSDIMRAGMLYDVYDIDIRIE
EIDGNRIGVYFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-37 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-34 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-35 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-35 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-35 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AAur_3854 YP_949532.1 iron ABC transporter ATP-binding protein BAC0164 Protein 1e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AAur_3854 YP_949532.1 iron ABC transporter ATP-binding protein VFG1042 Protein 1e-37 43
AAur_3854 YP_949532.1 iron ABC transporter ATP-binding protein VFG0925 Protein 1e-36 43