Gene Information

Name : AAur_3272 (AAur_3272)
Accession : YP_948968.1
Strain : Arthrobacter aurescens TC1
Genome accession: NC_008711
Putative virulence/resistance : Virulence
Product : ABC-type metal ion transport system
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 3595893 - 3596837 bp
Length : 945 bp
Strand : -
Note : identified by match to protein family HMM PF01297

DNA sequence : 
ATGCCTAACTTTTCGTTTCGGCGCGCCAAAGACGTCCGCCGTTTCGCTGCTGTCCTGACCGCGATCTCGCTTGCCCTGGG
GGTCTCCGCCTGCGGAGGGAACTCATCCGCGGGGGGTGATGACAAGCCCGTTGTCCTGACCACGTTTACTGTTTTGGCTG
ATGTGGCCAAGAACGTTGCGGGGGACAAGCTCCGCGTGGAGTCCATCACCAAAGCCGGAGCTGAGATCCACGGCTACGAG
CCAACGCCGGGGGACATCCGCAAGGCCGCCCAAGCTGACCTTATCTTGGACAACGGACTCAATCTCGAGGCCTGGTTCGC
CCAGTTCGTGGAGGACTTGGATGTGCCGCACGCGGTAGTCAGTGACGGGGTGGACGTTATGCCCATTGCAGAGGATTCCT
ACCAGGGCAAGCCGAACCCGCATGCGTGGATGTCGCCCAAGAATGTGCAGATCTACGCTGACAACATGGCCAAGGCCTTC
GCCAAGCTGGATCCTTCCCACGCTGCCGAGTTCGAGGCCAACGCCAAGGCTTACAACGCCCAGCTCCAAACCGTGCAGGA
CGAGATGGTGTCCAAGCTCTCCGTCCTTTCGGAGAAGCAGAGGGCGCTGGTCACCTGCGAAGGAGCATTCTCCTACCTGG
CCCGCGATGCCGGCCTCAAAGAGGTGTACATCTGGGCTGTGAACGCGGAGCAGCAGGCTACACCGCAGCAGATTACGCGG
GCTATCGAGTTCGTCAAGGACAACCAGGTTCCGGCGGTGTTCTGTGAGTCCACGGTGTCCGACGCACCCATGCAGCAGGT
TGTCGGAGCCACTGATGCCAAGTTCGGTGGGGTGCTCTACGTTGATTCCCTCTCTGAAGCGGACGGGCCCGTTCCCACCT
ATCTGGACCTCATGCGCCATGACGCCAAAGTCATCACCACTGCACTCACCGGAGGAACGCCGTGA

Protein sequence : 
MPNFSFRRAKDVRRFAAVLTAISLALGVSACGGNSSAGGDDKPVVLTTFTVLADVAKNVAGDKLRVESITKAGAEIHGYE
PTPGDIRKAAQADLILDNGLNLEAWFAQFVEDLDVPHAVVSDGVDVMPIAEDSYQGKPNPHAWMSPKNVQIYADNMAKAF
AKLDPSHAAEFEANAKAYNAQLQTVQDEMVSKLSVLSEKQRALVTCEGAFSYLARDAGLKEVYIWAVNAEQQATPQQITR
AIEFVKDNQVPAVFCESTVSDAPMQQVVGATDAKFGGVLYVDSLSEADGPVPTYLDLMRHDAKVITTALTGGTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-72 54
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 9e-73 53
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 9e-73 53
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 7e-73 53
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 9e-73 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AAur_3272 YP_948968.1 ABC-type metal ion transport system BAC0349 Protein 4e-73 53
AAur_3272 YP_948968.1 ABC-type metal ion transport system BAC0439 Protein 3e-68 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AAur_3272 YP_948968.1 ABC-type metal ion transport system VFG0525 Protein 4e-73 53