Gene Information

Name : AAur_3271 (AAur_3271)
Accession : YP_948967.1
Strain : Arthrobacter aurescens TC1
Genome accession: NC_008711
Putative virulence/resistance : Virulence
Product : cation ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3595162 - 3595896 bp
Length : 735 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
GTGAGCACTCCCGCGATCGCTGTTGAGAACGTCACCGTCCACTACGGTGAGGTCCTCGCCTTGGACTCTGCGTCCCTGAC
CTTGGACCATTCGCGGATTTGCGGCTTGGTCGGTATGAACGGCTCCGGCAAGTCCACCCTGTTCAAGGTCATCATGGGCA
TGGTCAAACCGGATTCCGGCCGGGTGCTCATCAACGGGCAGCCGCCGGTGAAGATGCGCAAGGAAGCCGGCATCGGCTAC
GTTCCCCAAAGCGAGGACGTTGACTGGGCCTTCCCGCTGTCCGTCCGGGATGTGGTGATGATGGGCCGCTACGGGCACCT
GGGATTCACGCGCCGGCCCCGCAAAGCGGACAAGGACGCCGTCGAGCATGCTTTGGAACGCGTGGAACTGAGCGAGTACG
CCGACCGCCAGATCGGGCAGTTGTCCGGCGGGCAGAAAAAACGGGCCTTCGTGGCCCGGGGCATCGCGCAAGGTGCCACC
ATGATGCTGCTGGATGAGCCGTTCGCGGGCGTGGATAAGCGGTCCGAGGCCACTATCACCAGGCTACTCCGCGAGCTGGC
CGAGGACGGCGCCACCATCCTCATCTCCACTCACGATCTCCACGCCCTGCCGCAACTTTGCGATGAAGCAGTGTTGCTGA
TGCGCAAGGTCCTCATGCATGGAAGTCCTGATACCGTGCTCCAACCGGAGAACCTGGCCATGGCCTTCGGCCTCGACGTC
ATGAACAGGGGCTAG

Protein sequence :
MSTPAIAVENVTVHYGEVLALDSASLTLDHSRICGLVGMNGSGKSTLFKVIMGMVKPDSGRVLINGQPPVKMRKEAGIGY
VPQSEDVDWAFPLSVRDVVMMGRYGHLGFTRRPRKADKDAVEHALERVELSEYADRQIGQLSGGQKKRAFVARGIAQGAT
MMLLDEPFAGVDKRSEATITRLLRELAEDGATILISTHDLHALPQLCDEAVLLMRKVLMHGSPDTVLQPENLAMAFGLDV
MNRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-55 52
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-56 52
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-56 52
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-55 51
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-55 51
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-38 41
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AAur_3271 YP_948967.1 cation ABC transporter ATP-binding protein BAC0350 Protein 5e-56 52
AAur_3271 YP_948967.1 cation ABC transporter ATP-binding protein BAC0440 Protein 3e-60 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AAur_3271 YP_948967.1 cation ABC transporter ATP-binding protein VFG0526 Protein 4e-56 52