|
Name : AAur_1972 (AAur_1972) Accession : YP_947717.1 Strain : Arthrobacter aurescens TC1 Genome accession: NC_008711 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2166593 - 2168194 bp Length : 1602 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : TTGTGGAGGAGGGCCAGCATGCCTGAGCTGGTTGTTGAGGATCTGACAGTCCACGGCGAAGACACAGGGCATCCGATCCT CGCCGGTGTCAGCTTGACGGTGAAGCCCGGCGAGTTTGTGGCGCTCGTGGGCGGCTCCGGTTCGGGGAAGACCATCACCG CACGGTCAGTCCTGCGGTTACTGCCTCAGCAGCTGAGGATTGAGTCTGGCTCCATCCGGCTCGGCTCGTTGGACATAACC CGAGCCTCGGAAACAGAGCTGAACCGCATCCGTGGCGGGCAGCTGGGGATGCTGTTCCAGCAGCCAAAAAAGATGTTCAA TCCCAGCAAAACAATCGGCGCCCATCTCAGGGAACCACTTAAACTGCACTCCGGGCTACGCGGCCAGGCAGCAAAAGCCA AGGTGCTCGAATTGCTGGCCGACGTGGGCTTCGAGGATCCGCAGCGGGGTATGCGCTCATACCCGCACCAGCTTTCCGGT GGCATGGCGCAGCGGGCGATGACTGCCATGGCGTTGGCAGCCCAGCCCGGCATCCTTCTGGCCGACGAGCCGACGTCCGC CCTGGACAAGGTGCTGGAGCAACAAATCCTTGAGCTGCTGGACAGGCAACGGATCCAGCGTGGCCTGGGAATCCTCTACA TCACGCATAACCTTGCCTCGGTGGCCGCATTTGCGGACAGGGTGCTGGTGATGAATGCCGGCGTGATCGTTGAATCCGGC ACCACCGAAGCTGTCCTGGGCAGCCCGAAGACCGCCTACACGCGCAAGCTCCTTGAAGCGTCCAACCTGGCGCCCACCGG AATCGCGGGCGCCCCCACCCGCCAGCGCAACGCCCTGACACTGAACACTGTGGTCAAGCATTTCGGATCCGGCAAACGCC GCGGGCGGCCCGCCTTGGACTCGATCTCGCTGGACGTACACCACGGCGAAATCCTTGGTGTCCTGGGTCAATCGGGATCG GGTAAGAGTACCCTCGCTCGTGCCATTGTTGGGTTGGAAGGCATCAGCAGCGGAAGCATCACCAGGACTCTCGACGCGGA TGGTGCGGGCCCAACAGCTGTGCAGCTGGTGTTCCAGGAGCCCCACGATTCCTTCGACCCCCGCATGACCCTCCGGGCCA GCCTTGAGGCGCCGCTCAGGTCGCGGAATGATCTCACCGCAGTTGAACGGTCCCGTAAGCTCACGGCAGCGATGGAGGAA GTCGAGCTTGATCCCGACATCCTGGATCGGCGTCCGGGGCAATGCTCCGGAGGTCAGTTGCAGCGGATGACCATAGCCCG GGCGTTGCTGTTGGAACCCGAGGTCCTGATCTGTGACGAAGCGACGTCAGCTTTGGACGCGGTGACCCAGCGGACCATCC TTGAACTGTTGCAGCGCCTGCACAGGGACCGCGGGCTGACTTTGATGATCATCACCCATGACATGGACGTGGTGAGGCAC ATGTGCCAGCGGGTTGCGGTCCTGTACCAAGGGTGCCTTGTGGAGCTCACGGACACGGACAAGTTCTTTGCAGATCCGCA GCACCAGCACAGCCAAGATCTGGTTTCGGCGGCCATCCCGTGCCGGGGGCTGCACTTGAAAAAGATCAGGGCGGCGCTTT AG Protein sequence : MWRRASMPELVVEDLTVHGEDTGHPILAGVSLTVKPGEFVALVGGSGSGKTITARSVLRLLPQQLRIESGSIRLGSLDIT RASETELNRIRGGQLGMLFQQPKKMFNPSKTIGAHLREPLKLHSGLRGQAAKAKVLELLADVGFEDPQRGMRSYPHQLSG GMAQRAMTAMALAAQPGILLADEPTSALDKVLEQQILELLDRQRIQRGLGILYITHNLASVAAFADRVLVMNAGVIVESG TTEAVLGSPKTAYTRKLLEASNLAPTGIAGAPTRQRNALTLNTVVKHFGSGKRRGRPALDSISLDVHHGEILGVLGQSGS GKSTLARAIVGLEGISSGSITRTLDADGAGPTAVQLVFQEPHDSFDPRMTLRASLEAPLRSRNDLTAVERSRKLTAAMEE VELDPDILDRRPGQCSGGQLQRMTIARALLLEPEVLICDEATSALDAVTQRTILELLQRLHRDRGLTLMIITHDMDVVRH MCQRVAVLYQGCLVELTDTDKFFADPQHQHSQDLVSAAIPCRGLHLKKIRAAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-72 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-72 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-72 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-72 | 41 |
