|
Name : clpB (AAur_1880) Accession : YP_947629.1 Strain : Arthrobacter aurescens TC1 Genome accession: NC_008711 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2053976 - 2056612 bp Length : 2637 bp Strand : + Note : identified by similarity to SP:P53533; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGAACATGGAGAGCTTTACCCAGAAGTCGCAGGAGGCGTTGGCAGGGGCACAGCGGATCGCCCAGCAACACGGCCATAC CGAGACCGACGGGGAGCACCTGCTTGCGGCCCTGCTGGAACAGGAGGCGGGACTGGTCCCGCGACTGCTCGCAGGCATGC AGATTGACGTTGAGGAGCTGAACAGGGCGGTCGAGACCGAGCTGCAAAAGAAGCCGAAAGTCACGGGGCCTGGCGCAGCA CCCGGTCAGGTGTACGTCAGCCGTAGGCTTGGCACACTCCTTGATGCTGCTGAACGTGAAGCCAAACGGCTCAAAGACGA GTACGTCTCGGTGGAACACCTGCTGGTCGCGCTTGCGGAGGAAGGCCGGGCATCGGCGGCCGGCAGGGTGCTGGCGGAAC ACGGCATTACCCGCGAGGCATTCTTGTCGGTCCTGACCCAGGTTAGGGGAAACCAGCGCGTTACCTCGGCAACGCCGGAA CAAACCTACGAAGCGCTGGAGAAGTACGGCCGCGATCTGGTGGCGGACGCGCGTACCGGAAAGCTGGATCCGGTCATCGG CCGCGACTCGGAAATCCGGCGGGTTGTCCAGATACTGTCACGCAAGACCAAAAACAACCCGGTGCTTATCGGTGAGCCTG GAGTCGGCAAAACCGCCATTGTGGAGGGACTGGCCCAGCGGATCGTCCGGCAGGATGTGCCCGAAGGCCTGAAGAACAAG ACCATTTTCTCGCTGGACCTGAGCGCCCTGGTGGCCGGTGCCAAGTACCGCGGCGAATTCGAGGAACGGTTGAAGGCTGT GCTGGCCGAGGTGCTGGCGGCAGAAGGCAGGATCCTGCTCTTTGTGGACGAACTGCACACCGTCGTCGGGGCAGGCGCTT CCGAGGGGTCGATGGACGCCGGCAACATGCTGAAGCCCATGTTGGCCCGCGGGGAGCTGCACATGATCGGCGCTACCACG CTCGACGAATACCGCAAACACATCGAGTCTGACGCCGCATTGGAGCGCCGCTTCCAGCCGGTCACGGTTGAGGAGCCCGA CGTCGAGGACGCCATTTCAATCCTTCGAGGCTTGCGGGAGCGACTCGAGGTATTCCATGGCGTACGGATCCAGGATAGTG CCCTGGTGGCCGCGGCCACCCTTTCCCACCGGTACATCACTGACCGGTTTCTTCCCGACAAGGCCATTGACCTTGTGGAT GAAGCGTGCGCCCGGCTCAGGACGGAAATCGACTCGATGCCGGCGGAACTGGATGAGCTCACCCGGAAGGTCACGCGGCT CGAAATCGAAGACGCGGCACTTGCCAAGGAAACCGATCCGGCCAGCAAGACCCGGCTCACGGAGTTGAGGCGTGAATTGG CGGACTTGCGCGCCGAAGCCGACGCCAAGAGGGCCCAATGGGAGGCCGAGCGCCAGGCGATCCACAAACTGCAGGAAATA CGTACTGAACTGGAGCGGGCGCGGCTGGAGGCTGAGGAAGCCGAACGGAATTACGACCTCAACCTGGCGGCAGAGCTACG CTACGGGCGACTTGCCGACCTCGAACGGCGGCTGGCCGCCGAAGAAGAACGGCTGACCGCTAAACAGGGCGAAAAGCGCT TGCTCCGCGAGGTGGTGACCGAGGACGAGATCGCCGACATTGTCGCGGCCTGGACCGGGATACCGGTCGCCCGGCTGAAG CAGGGCGAACGGGAGAAGGTCCTTCACCTGGATGAAATCCTTCGCGCCCGCGTCGTCGGACAGGAAGAAGCGATTACCGC GGTGTCGGACGCCATTATCCGGGCCCGCTCCGGTATCCGGGATCCCCGGCGACCCATCGGCTCCTTCATCTTCCTCGGCC CCACGGGAGTCGGGAAGACCGAGCTTGCCAAGGCATTGGCTGCATCGCTATTTGACAGCGAGAACGCAATGATCCGGCTG GATATGAGCGAGTATCAGGAACGCCACACAGTGAGCCGCCTGCTGGGCGCTCCGCCCGGCTACATCGGCTACGACGAAGG AGGACAGCTCACAGAAGCGGTACGCCGGAAGCCATACTCGGTGGTGCTCTTTGACGAGGTGGAAAAGGCCCATCCGGACA TCTTTAACACCTTGTTACAGGTGCTCGACGACGGACGGATTACAGACTCGCAGGGCCGGACGGTCGATTTCCGCAACACT GTCATCATTATGACGTCGAATATTGGCTCCCAGTATCTTCTGGAAGGTTCGGCCGAAGGAGGGACGATCACGGAGGAGGC GCGCGGCATGGTGATGGGTGAGCTCCGGGCGCACTTCCGACCCGAGTTCCTTAACCGCGTCGACGACACGGTCCTGTTCG CGCCCTTGGGACTGGCGCAAATCGAACGAATCGTTGATCTGCTGTTTCAGCAGCTGCGGCAGCGGCTGGCCGAGCAGCAA ATAGAGCTGCACCTGACCGAACAAGCACGCCTTCTGATTGCCGAACGGGGCTTCGATCCGGTCTACGGAGCCCGGCCCTT GCGCCGCTATATTTCCCATGTTGTCGAAACGCAGGTGGGTCGGGCCTTGCTGCGCGGAAGCATCGAGGAGGGCGGAGTGA TCACAGTGACCGTATCCGGAAACGAGCTCGTGGTTGAATACAACACATCGGAGCTAGAGGAGGCCGGAACCACATGA Protein sequence : MNMESFTQKSQEALAGAQRIAQQHGHTETDGEHLLAALLEQEAGLVPRLLAGMQIDVEELNRAVETELQKKPKVTGPGAA PGQVYVSRRLGTLLDAAEREAKRLKDEYVSVEHLLVALAEEGRASAAGRVLAEHGITREAFLSVLTQVRGNQRVTSATPE QTYEALEKYGRDLVADARTGKLDPVIGRDSEIRRVVQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRQDVPEGLKNK TIFSLDLSALVAGAKYRGEFEERLKAVLAEVLAAEGRILLFVDELHTVVGAGASEGSMDAGNMLKPMLARGELHMIGATT LDEYRKHIESDAALERRFQPVTVEEPDVEDAISILRGLRERLEVFHGVRIQDSALVAAATLSHRYITDRFLPDKAIDLVD EACARLRTEIDSMPAELDELTRKVTRLEIEDAALAKETDPASKTRLTELRRELADLRAEADAKRAQWEAERQAIHKLQEI RTELERARLEAEEAERNYDLNLAAELRYGRLADLERRLAAEEERLTAKQGEKRLLREVVTEDEIADIVAAWTGIPVARLK QGEREKVLHLDEILRARVVGQEEAITAVSDAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKALAASLFDSENAMIRL DMSEYQERHTVSRLLGAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDIFNTLLQVLDDGRITDSQGRTVDFRNT VIIMTSNIGSQYLLEGSAEGGTITEEARGMVMGELRAHFRPEFLNRVDDTVLFAPLGLAQIERIVDLLFQQLRQRLAEQQ IELHLTEQARLLIAERGFDPVYGARPLRRYISHVVETQVGRALLRGSIEEGGVITVTVSGNELVVEYNTSELEEAGTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_947629.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 2e-103 | 43 |
| clpB | YP_947629.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 3e-113 | 42 |
