Gene Information

Name : glnA (AAur_1744)
Accession : YP_947504.1
Strain : Arthrobacter aurescens TC1
Genome accession: NC_008711
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1905320 - 1906744 bp
Length : 1425 bp
Strand : -
Note : identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653

DNA sequence :
ATGTTCAAGACTGCGGACGAAGTCCTCAAGTTCATCAAAGACGAAGACGTCAAATTCGTCGATATCCGCTTCACCGACCT
TCCTGGTGTCCAGCAGCACTTCAACGTGCCGGCCAAGAGTGTCGACCTCGATTTCTTCGTCCACGGCCAGCTCTTCGACG
GATCTTCAATCCGCGGCTTCCAGGGCATCGCCGAGTCCGACATGCAGCTCATCCCGGATGTGACCTCGGCTTTCATCGAC
ACCTTCCGCATTGAGAAGACGCTCGCACTGAACTTCTCCATCGTGAACCCCCGCACCGGTGACCCGTACCACCGCGATCC
CCGCGGCGTGGCAGAGAAGGCTGAAGCGTACCTGGCATCCACAGGCATCGCCGACACCGCGTTCTTCGCTCCCGAAGCCG
AATTCTTCGTCTTCGACAACATCCAGTACGAGTCCTCCCCGCAGGGCAGCTTCTACAAGATCGACTCTGAAGAAGCACAC
TGGAACACCGGGCGCAAGGAAGAGGGCGGAAACCTCGGATACAAGACCCCCGTCAAGGGCGGTTACTTCCCGGTCTCCCC
CACCGACAAGCAGGCCGACCTTCGCGACGCCATGTGCATCGAGCTGGACAAGGCCGGCCTTGAGGTCGAGCGCTCCCACC
ACGAAGTTGGATCCGCCGGCCAGGCTGAGATCAACTACAAGTTCACCACGCTGACCGCGGCTGCTGATGACCTGCAGAAG
TTCAAGTACATCATCAAGAACACCGCAGATGCTTGGGGCAAGTCCGTCACGTTCATGCCGAAGCCCGTCTTCGGTGACAA
CGGCTCGGGCATGCACTGCCACCAGTCGCTGTGGAGCAACGGCGATCCGCTGTTCTATGACGAGAAGGGCTACGCCGGCC
TTTCCGACACCGCTCGCTGGTACATCGGTGGCCTGCTGAAGCACTCTTCCGCAGTCCTGGCCTTCACCAACCCGACGGTT
AACTCCTACCGCCGCCTGGTCAAGGGCTTCGAAGCTCCGGTGAACATGGTCTACTCGCAGGGCAACCGCTCCGCTGGTAT
CCGTATCCCGATCACGGGCACCAACCCGAAGGCCAAGCGCATTGAGTTCCGCGCGCCGGACCCCTCATCCAACCCGTACC
TGGCGTTCGCTGCACAGCTGATGGCCGGCATCGACGGTATCCGCAACCGCATTGAGCCCCCGGCTCCCATCGACAAGGAC
CTCTACGAGCTCCCGGCCGAGGAAGCCAAGGACATCCCCAAGGCTCCGGGCACCCTGGAAGAAGCACTTGAGGCCCTGCG
CGAGGACAACGAGTTCCTCCAGGCCGGCGGCGTCTTCACCCAGGACCTCATCGATACTTGGATTGACTACAAGTACGAGA
ATGAGATCCGCCCGCTGTCACTGCGCCCGAACCCCTACGAGTTCGAGCTCTACTACGGCGTCTAG

Protein sequence :
MFKTADEVLKFIKDEDVKFVDIRFTDLPGVQQHFNVPAKSVDLDFFVHGQLFDGSSIRGFQGIAESDMQLIPDVTSAFID
TFRIEKTLALNFSIVNPRTGDPYHRDPRGVAEKAEAYLASTGIADTAFFAPEAEFFVFDNIQYESSPQGSFYKIDSEEAH
WNTGRKEEGGNLGYKTPVKGGYFPVSPTDKQADLRDAMCIELDKAGLEVERSHHEVGSAGQAEINYKFTTLTAAADDLQK
FKYIIKNTADAWGKSVTFMPKPVFGDNGSGMHCHQSLWSNGDPLFYDEKGYAGLSDTARWYIGGLLKHSSAVLAFTNPTV
NSYRRLVKGFEAPVNMVYSQGNRSAGIRIPITGTNPKAKRIEFRAPDPSSNPYLAFAAQLMAGIDGIRNRIEPPAPIDKD
LYELPAEEAKDIPKAPGTLEEALEALREDNEFLQAGGVFTQDLIDTWIDYKYENEIRPLSLRPNPYEFELYYGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 7e-83 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_947504.1 glutamine synthetase VFG1399 Protein 2e-140 64