Gene Information

Name : AAur_1380 (AAur_1380)
Accession : YP_947158.1
Strain : Arthrobacter aurescens TC1
Genome accession: NC_008711
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1482545 - 1484068 bp
Length : 1524 bp
Strand : -
Note : identified by match to protein family HMM PF00171

DNA sequence :
ATGACCGTCTACGCCAACCCGGGCACCGAGGGATCGCTGATCACCTTCAAGCCGCGCTACGACCACTACATCGGCGGCGA
GTGGAAGGCCCCGATCAAGGGCCGGTACTTCGAGAACGTCACCCCGGTCACCGGCCAGGTCTTCACGGAGGTCGCCCGCG
GCACGGCCGAGGACATCGAGGCGGCCCTGGACGCCGCGCACGGGGCCGCCCCGGGCTGGGGCCGCACCTCCGCGGCCGAG
CGCGCGGTCATCCTGAACAGGATCGCCGACCGCATGGAGGCGAACCTTGAGCTGCTGGCGATCGCGGAGACCTGGGACAA
CGGCAAGGCCGTGCGGGAGACGCTGAACGCGGACCTGCCGCTGGCGATCGACCACTTCCGCTACTACGCCGGCGCCATCC
GCGCCCAGGAGGGCCGGCTGTCCCAGATCGACGAGAACACCACCGCCTACCACTACCACGAGCCGCTGGGCGTGGTGGGC
CAGATCATCCCCTGGAACTTCCCGATCCTGATGGCCGTGTGGAAGCTGGCTCCCGCGCTCGCGGCGGGCAACGCCGTCGT
GCTCAAGCCGGCCGAGCAGACCCCGGTCTCCATCCTGGTGCTCGCCGAACTGGTCGGGGACCTGCTCCCGGCCGGCGTGC
TGAACATCGTCAACGGCTTCGGGCTGGAGGCGGGCAAGCCGCTGGCCTCCAGCAAGCGCATCCGCAAGATCGCTTTCACC
GGCGAGACCACCACGGGCCGGCTGATCATGCAGTACGCCTCCGAGAACCTGATCCCGGTGACGCTGGAGCTCGGCGGCAA
GAGCCCGAACATCTTCTTCGAGGACGTCGCAGACGCCCACGACGCGTTCTACGACAAGGCGCAGGAGGGCTTCACGCTCT
TCGCCCTGAACCAGGGCGAGGTCTGCACCTGCCCGTCGCGGGCCCTGATCCAGGACTCGATCTACGACCGGTTCCTCGGC
GACGCGGTCGCCCGCACCCGGCGGATCGTCCAGGGCAACCCGCTGGACACGGCCACCATGATGGGCGCCCAGGCCTCCAA
CGACCAGCTGGAGAAGATCCTCTCCTACATCGACATCGGCAGGCAGGAGGGCGCCAAGGTCCTCACCGGCGGGGCCCGGG
CCGACCTCGGCGGGGAGCTGGCCGGGGGCTACTACGTGCAGCCGACCATCTTCGAGGGCGACAACTCCATGCGCATCTTC
CAGGAGGAGATCTTCGGCCCCGTGGTCTCCGTGACTCGCTTCGGCGAGTACGCGGACGCGATCAAGACCGCCAACGACAC
CCTCTACGGGCTCGGCGCCGGCGTCTGGAGCCGCAACGGCTCGGTGGCCTACCAGGCCGGGCGCGAGATCCAGGCCGGCC
GCGTCTGGGTGAACAACTACCACGCCTACCCGGCCCACGCCGCGTTCGGCGGGTACAAGTCCTCCGGCATCGGCCGCGAG
ACGCACCTGATGATGCTGGACCACTACCAGCAGACCAAGAACCTGCTGGTGTCCTACTCCCCGGACGCCCTCGGCTTCTT
CTAG

Protein sequence :
MTVYANPGTEGSLITFKPRYDHYIGGEWKAPIKGRYFENVTPVTGQVFTEVARGTAEDIEAALDAAHGAAPGWGRTSAAE
RAVILNRIADRMEANLELLAIAETWDNGKAVRETLNADLPLAIDHFRYYAGAIRAQEGRLSQIDENTTAYHYHEPLGVVG
QIIPWNFPILMAVWKLAPALAAGNAVVLKPAEQTPVSILVLAELVGDLLPAGVLNIVNGFGLEAGKPLASSKRIRKIAFT
GETTTGRLIMQYASENLIPVTLELGGKSPNIFFEDVADAHDAFYDKAQEGFTLFALNQGEVCTCPSRALIQDSIYDRFLG
DAVARTRRIVQGNPLDTATMMGAQASNDQLEKILSYIDIGRQEGAKVLTGGARADLGGELAGGYYVQPTIFEGDNSMRIF
QEEIFGPVVSVTRFGEYADAIKTANDTLYGLGAGVWSRNGSVAYQAGREIQAGRVWVNNYHAYPAHAAFGGYKSSGIGRE
THLMMLDHYQQTKNLLVSYSPDALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-142 62
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-151 61
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-151 61
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-151 61
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-150 61
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-70 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AAur_1380 YP_947158.1 aldehyde dehydrogenase VFG0082 Protein 5e-143 62