|
Name : Ping_0887 (Ping_0887) Accession : YP_942328.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Unknown Product : Na+/H+ antiporter NhaC Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 1111965 - 1113305 bp Length : 1341 bp Strand : - Note : PFAM: Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vfi:VF0924 transport protein DNA sequence : ATGATCAACCCCGTTGTACTCTCAGTCTGCGTGATGCTGGCTTTGTCTTTAATGCGTATTAATGTAGTAATAGCATTAAC ATTAAGTGCATTAATCGGAGGGTTAAGTGCCGGTATGTCAGTCTCTGATACCGTCAGTGCTTTTGAAGGAGGATTGGGTG GCGGTGCAACCATTGCATTAAGTTACGCTATGCTGGGTGCATTTGCAGTGGCAATTTCTAAATCAGGTATTACCGATTTA TTAGCACAAACAGTTATTAATAAAGTACATGGCAGGCACCCGGATCATTTAACCTACGTGATAAAATATGTGGTGTTATC TTTAATTTTATTAATAACTATTTCATCACAGAATATTATCCCTGTGCATATCGCCTTTATTCCCATTTTAATTCCACCAC TGATCAGCGTATTTACAAAATTACGTTTAGACAGACGCTTAGTGGCGTGTATATTAACCTTTGGTTTAATCACGCCTTAT ATGGTTTTACCGATAGGTTTTGGCGGTATCTTTTTAAATAATATATTATTAAAAAATTTACATGATAATGGCCTGGAAGT AACCGCCAGCCAGGTTCCAACAGCAATGATCTTACCTGCTTTAGGTATGGTTACCGGTTTACTGATTGCAGTCTTTATTA GCTACCGTAAGCCACGGGATTATCCTCAGGGAGAGTCACTATTTACACCCGCAGAAAATCAAAAACCCGCAAAAACCCCC TTAAACAAGCGCCATATAGTGGTTGCCTTGATTGCAATTTCAGCAACATTAAGCATACAGTTATTGTCAGGCTCGATGAT AGTCGGCGCATTGGCTGGATTTGTCGTCTTTACCTTTGGTGGTGTTATAGCTTGGAAAGAAACGCAAGATGTATTTACTA AAGGTGTGCATATGATGGCAATGATCGGTTTTATTATGATTGCCGCTGCCGGTTTTACAGCCGTAATGAAAGCCACGGGT AGCGTAGACACCCTGGTTGAGATGTTATCTGCAAATATTGGCCAAAATAAACCACTAGCAGCCGTATTAATGCTGGTAGT CGGTTTGTTAGTGACCATGGGAATAGGCTCTTCTTTTTCAACTATTCCAATTATTGCCACTATTTACGTTCCTCTTGCCC TCTCATTTGGATTTTCACCGATGGCAATCATCGCATTAGTTGGAACAGCAGCGGCGTTGGGGGATGCAGGTTCACCGGCG TCGGACTCGACTCTGGGGCCGACAGCGGGTCTAAACGCCGATGGTAAACACGATCATATTTGGGATACCGTTGTACCGAC CTTTATTCACTATAACCTACCCTTAATGGTATTTGGCTGGATTGCAGCGATGAGTTTGTAA Protein sequence : MINPVVLSVCVMLALSLMRINVVIALTLSALIGGLSAGMSVSDTVSAFEGGLGGGATIALSYAMLGAFAVAISKSGITDL LAQTVINKVHGRHPDHLTYVIKYVVLSLILLITISSQNIIPVHIAFIPILIPPLISVFTKLRLDRRLVACILTFGLITPY MVLPIGFGGIFLNNILLKNLHDNGLEVTASQVPTAMILPALGMVTGLLIAVFISYRKPRDYPQGESLFTPAENQKPAKTP LNKRHIVVALIAISATLSIQLLSGSMIVGALAGFVVFTFGGVIAWKETQDVFTKGVHMMAMIGFIMIAAAGFTAVMKATG SVDTLVEMLSANIGQNKPLAAVLMLVVGLLVTMGIGSSFSTIPIIATIYVPLALSFGFSPMAIIALVGTAAALGDAGSPA SDSTLGPTAGLNADGKHDHIWDTVVPTFIHYNLPLMVFGWIAAMSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-85 | 53 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-85 | 53 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-85 | 53 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-85 | 53 |
| BJAB0868_00356 | YP_008211682.1 | putative permease | Not tested | AbaR26 | Protein | 4e-80 | 50 |
| BJAB07104_00352 | YP_008207817.1 | putative permease | Not tested | AbaR25 | Protein | 4e-80 | 50 |
