Gene Information

Name : Ping_0004 (Ping_0004)
Accession : YP_941478.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : ATP-dependent protease peptidase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG5405
EC number : -
Position : 9207 - 9761 bp
Length : 555 bp
Strand : -
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGACTACCATTGTTTCAGTACGTCGTGGCAACCAAGTTGTTGTCGGTGGTGATGGTCAAGTTTCTCTTGGCAATACGGT
TATGAAAGGTAACGCACGTAAAGTACACAGACTCTATAACAATCAAGTAATAGCTGGTTTTGCTGGCGGTACAGCTGATG
CATTTACCCTGTTAGAACGTTTTGAGGCTAAGCTTCAGGCACACCAGGGTAATCTTGAACGAGCAGCGGTTGAATTAGCG
AAAGACTGGCGTACCGATCGATCGTTGCGCAGACTTGAAGCGCTATTAGCTGTGGCGGATAAAAACTCTTCTTATATTAT
TACTGGTAATGGTGATGTAGTCAGACCTGAAAATGATTTAATGGCGATCGGCTCTGGTGGTTATTTTGCACAATCGGCAG
CGATTGCCTTGTTAGAAAATACCGATTTAGACGCGAAAACAATTGTCGAAAAAGCATTGGCTATAGCAGGCAATATTTGT
GTTTTTACTAATGAAACTCACACTATTGAATGCATTGATTTCTCTGATGAAATTACTACTGAAAGTAAAAAATAG

Protein sequence :
MTTIVSVRRGNQVVVGGDGQVSLGNTVMKGNARKVHRLYNNQVIAGFAGGTADAFTLLERFEAKLQAHQGNLERAAVELA
KDWRTDRSLRRLEALLAVADKNSSYIITGNGDVVRPENDLMAIGSGGYFAQSAAIALLENTDLDAKTIVEKALAIAGNIC
VFTNETHTIECIDFSDEITTESKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 2e-23 46