Gene Information

Name : Ping_3710 (Ping_3710)
Accession : YP_944984.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4517371 - 4518060 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_3462 ABC transporter related

DNA sequence : 
ATGATCGAATTAAAGAATATTCATCGTGACTTTCTGGTTGGAGAGCAAAAGGTACATGCCCTCGATAATATTAATCTGTC
CATTGTGGCGGGTGAATATATTTCTATTATGGGACCTTCGGGTTCAGGGAAATCAACCTTGCTGAATTTAATTGGTCTGT
TGGATAGCGCCACGGCAGGCACTTATTTATTAAATCAGCAGGATGTTACCGCGCTGCCCGATGACAAGCAGGCTGCCACC
CGCAGTAAAATTATTGGTTTTGTTTTTCAGGCCTTTCACCTGATCCCCCGATTAACGGCAGCAGATAACATAGAGCTGCC
TTTAATGCTTGCCGGTATGGAGCCTCTGCAGCGCAGTCCTCTGGTTAACAAAGCGCTCACAGAAATGGACTTGAGCGATC
GTGCTCACCATCGACCCGATCAGCTTTCTGGTGGCCAGCGCCAACGTGTTGCGATTGCCCGTGCCACTATTATGCAGCCG
AAGATATTACTGGCCGATGAGCCGACGGGTAATCTGGATCAAAAATCCGGTCAGGATGTGATTAATATTCTCGAGCAGCT
TAACCGGCAGGGGATAACGGTCATTATTGTGACTCATGACAGCAATATTGGCGGGCGGGCAACGCGGCAATTAAAAATGG
TTGATGGCCGTATTGAATCGGATCAGCCTTTATCTCCGGCCTGCTTATGA

Protein sequence : 
MIELKNIHRDFLVGEQKVHALDNINLSIVAGEYISIMGPSGSGKSTLLNLIGLLDSATAGTYLLNQQDVTALPDDKQAAT
RSKIIGFVFQAFHLIPRLTAADNIELPLMLAGMEPLQRSPLVNKALTEMDLSDRAHHRPDQLSGGQRQRVAIARATIMQP
KILLADEPTGNLDQKSGQDVINILEQLNRQGITVIIVTHDSNIGGRATRQLKMVDGRIESDQPLSPACL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_3710 YP_944984.1 amino acid ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-61 63
Ping_3710 YP_944984.1 amino acid ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-54 50
Ping_3710 YP_944984.1 amino acid ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-40 43
Ping_3710 YP_944984.1 amino acid ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-36 41