Gene Information

Name : Ping_3642 (Ping_3642)
Accession : YP_944924.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4456392 - 4457324 bp
Length : 933 bp
Strand : -
Note : KEGG: pha:PSHAa0098 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence : 
ATGACTGCTCAAAAAATTCGTATTGCGACTCGCCATAGCCCTCTGGCTATGTGGCAAGCTAACTTTATTAAATCAGAACT
TTTAAAATATCACCCGAATCTAATCGTTGAACTTTTACCGATGAAAACTAAAGGCGATATAATATTAGATACGCCTTTAG
CTAAAGTGGGCGGAAAAGGTCTTTTTGTTAAAGAGTTAGAAGTTGCCATATTAGAAGGGCGAGCAGATATCGCGGTACAT
TCGATAAAGGATGTGCCTGTTGATTTCCCCGAGGGATTAGGGTTAACAACTATTTGTAAACGAGAAGATCCCCATGATGC
TTTTGTGTCCAATCATTATAAACAGTTAGATGAGCTACCAGAAGGTGCAATAGTGGGGACCTGCAGCCTGCGCCGTCAAT
GTCAGATTCTAGCTTTACGCCCGGACATTATTATTAAAAATCTGCGTGGTAATGTGAATACACGTTTACGTAAGTTAGAT
GAGGGTGAATACGATGCTATTATTTTAGCCGCAGCGGGTTTAATGCGTTTAGAAATGCAACATAGAATCACCTCTTTGAT
CGCACCTGAGGTTAGCCTTCCCGCTGTAGGGCAAGGCGCAGTCGGAATTGAATGCCGTTTAGATGACGAGCAGACTATCA
CCTTATTGAAACCACTTGAAGATCCAGAAACGCGCATAAGAATAACGGCTGAACGAGCAATGAATCTCAAATTGCAGGGC
GGTTGTCAGGTGCCTATTGGGAGCTTTGCCATACTTGAAAATGAACAACTATTTTTGCGCGGTTTAGTTGGCAGTGTAGA
TGGGAAACAGATTATCCGCAAAGAAATAACTGGCCATCAGAATGATGCGCAGCAATTAGGCATTACCCTTGCTGAGCAAT
TATTAGCCTGCGGCGCAGAAGAAATTCTTGCTGAAGTTTATAAAAACCAATGA

Protein sequence : 
MTAQKIRIATRHSPLAMWQANFIKSELLKYHPNLIVELLPMKTKGDIILDTPLAKVGGKGLFVKELEVAILEGRADIAVH
SIKDVPVDFPEGLGLTTICKREDPHDAFVSNHYKQLDELPEGAIVGTCSLRRQCQILALRPDIIIKNLRGNVNTRLRKLD
EGEYDAIILAAAGLMRLEMQHRITSLIAPEVSLPAVGQGAVGIECRLDDEQTITLLKPLEDPETRIRITAERAMNLKLQG
GCQVPIGSFAILENEQLFLRGLVGSVDGKQIIRKEITGHQNDAQQLGITLAEQLLACGAEEILAEVYKNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-83 60
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-83 60