Gene Information

Name : Ping_3492 (Ping_3492)
Accession : YP_944774.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 4321316 - 4323388 bp
Length : 2073 bp
Strand : -
Note : KEGG: vpa:VP0157 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: helicase domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein;

DNA sequence :
ATGAAATTAGATAAAATGCCCTTAACGGCGCTTAAAGGGGTCGGCATTAAAGCCTCGCAAAGGCTGGCTAAGATTGGTCT
GCACAGTGTTGCTGATTTGCTCTTTCATCTGCCTTTGCATTATCAAGATAGAACCCGAATTTATGCCATCGCAGATTTAA
AAGACAGTATGCAGGTCAGTGTGCAGGGCAAAGTATTAAGCTGCGATCTACAGTCCGGCAAGAGACGCATTCTAAAATGT
AAAATAAGCGACGGCAGTGGTAGCGTAACCCTTAACTTCTTCCATTTTAATACAGCACAGCAAAATAGCTTTGTAAAAGG
GGCATTAATCAAATGTTTTGGTGAGTTTCGTCGCGGTTACCACGGGTTTGAAGTTACTCATCCCGATTACCGCCTGCTTA
ATGCAATGCAGCAAAGCCATGTTGAGGAGACGTTAACGCCGATCTACCCGTCAACAGAAGGTTTAAAACAAAACAGTCTG
CGTAGTTTAACCGAGCAAGCGTTACTTCACCTAGAGCAACATCAGATTGATGAATTATTGCCAACTCATCTGCTGGCTCA
CCCGATCAGTTTATCAGATGCACTTTTTTATATACATCGCCCGCCACCCGATGCCAGCATCGAACAATTAGAAAACAAAA
CCCACCCTGCGCAGCAACGTTTAATTATTGAAGAATTATCAGCACAACAAATCAGTATGCTGTCTTTACGGGTAAATGCA
CAGCAACATCAAGCCATTGCGGTCAAAGAAAGCGGTTTACTGCAGGATAGGTTATTACAAAGTCTGCCTTTTTCTCTCAC
TAATGCACAACATAGAGTGAACTGGGAGATTCAACAGGATCTAAAGCAAACAATACCGATGATGCGTTTGGTGCAGGGGG
ATGTCGGATCCGGGAAAACCTTAGTGGCAGCGATCGCGGCATTAAGTGTTATTGAGGCAGGTTATCAGGTGGCATTAATG
GCCCCCACTGAACTTTTAGCAGAGCAGCATCTGCTTAATTTTCAAAAATGGTTTGCCGCACTTGATGTGTCTGTCGGTAT
GCTTTCTGGAAAAATGCGCGTCAAAGAAAAGCGTTCTCAGTTAGAAAATATCAGCTTGGGTTTATCGAAGATGGTGGTAG
GGACGCATGCGCTGTTTCAGGAAAGTGTCCAGTTTAATAATTTGGCTCTTATTATTGTGGACGAGCAGCATCGCTTTGGC
GTACACCAGCGTTTAGCATTACGTGAAAAAGGGCGCTCAGGTGATTTTGCTCCGCATCAGTTAACCATGACGGCAACCCC
TATACCAAGAACGCTGGCGATGACAGCTTATGCGGATCTTAATGTCTCGGTCATTGATGAACTGCCACCGGGAAGAACGG
CCATTAAAACCGTTGCACTGGTTGATAAGCGTCGTGACGAGGTTATTCAGCGGGTTTACCAGGCATGTAAAAATGAGGGG
CGGCAGGCCTATTGGGTATGCACTTTGATTGAAGAATCGGAAGTATTGGAATGCCAGACAGCAGAAAATACCGCTAATGA
GATGCAGTTGGCGCTTCCAGATCTTCGTATCGGCCTTGTTCACGGACGTATGAAGGCTAACGAAAAGCAGTCTGTTATGG
ACGCTTTTAAAGAGGGGCAGCTGGATTTATTAGTTGCAACAACAGTCATTGAGGTGGGTGTGGATGTGCCTAATGCCAGC
CTGATGATTATTGAAAATCCGGAACGACTTGGACTGGCGCAATTGCACCAGTTGCGTGGTCGAGTAGGACGAGGTGAAGT
GGCCAGCCATTGTGTTTTGCTATATAAAAATCCACTGTCGAAAACCGCCCAAAGACGTTTGCAGGTGTTGCGTGAAAGCA
ATGATGGTTTTTATATTGCCGAACAGGATCTGGCTATTCGCGGTCCTGGTGAAGTGTTAGGCACCAGACAGACGGGCGTT
GCTGAATTTAAAATAGCTGATTTGCTGCGCGATCAAAGTTTATTACCGCAAGCGCAGCAATTGGCCTTTCAGCTGATGCA
TTCTTTCCCTGAGTTAATTCCAGAACTTATCCAGCGTTGGTTAGGGGATAAGGATCGTTATGTTCATGCCTAG

Protein sequence :
MKLDKMPLTALKGVGIKASQRLAKIGLHSVADLLFHLPLHYQDRTRIYAIADLKDSMQVSVQGKVLSCDLQSGKRRILKC
KISDGSGSVTLNFFHFNTAQQNSFVKGALIKCFGEFRRGYHGFEVTHPDYRLLNAMQQSHVEETLTPIYPSTEGLKQNSL
RSLTEQALLHLEQHQIDELLPTHLLAHPISLSDALFYIHRPPPDASIEQLENKTHPAQQRLIIEELSAQQISMLSLRVNA
QQHQAIAVKESGLLQDRLLQSLPFSLTNAQHRVNWEIQQDLKQTIPMMRLVQGDVGSGKTLVAAIAALSVIEAGYQVALM
APTELLAEQHLLNFQKWFAALDVSVGMLSGKMRVKEKRSQLENISLGLSKMVVGTHALFQESVQFNNLALIIVDEQHRFG
VHQRLALREKGRSGDFAPHQLTMTATPIPRTLAMTAYADLNVSVIDELPPGRTAIKTVALVDKRRDEVIQRVYQACKNEG
RQAYWVCTLIEESEVLECQTAENTANEMQLALPDLRIGLVHGRMKANEKQSVMDAFKEGQLDLLVATTVIEVGVDVPNAS
LMIIENPERLGLAQLHQLRGRVGRGEVASHCVLLYKNPLSKTAQRRLQVLRESNDGFYIAEQDLAIRGPGEVLGTRQTGV
AEFKIADLLRDQSLLPQAQQLAFQLMHSFPELIPELIQRWLGDKDRYVHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-97 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_3492 YP_944774.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 58