Gene Information

Name : Ping_3484 (Ping_3484)
Accession : YP_944766.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 4310715 - 4312133 bp
Length : 1419 bp
Strand : +
Note : KEGG: vch:VC2746 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp

DNA sequence : 
ATGTCTACAAAAACAGTACAAGATGTTCTTGATTTTATTAAAGAGCAAGAGGTAAAATTCGTAGATTTACGCTTTACCGA
TACACACGGTAAAGAGCAACACGTCTCTATTCCGCATCACCAAGCAAACGAAGACTTTTTCGAAGACGGTAAAATGTTTG
ATGGCTCTTCAATTGCAGGATGGAAAGGCATTCAAGATTCGGACATGGTATTAATGCCGGATCCAACCACTGCTGTTCTT
GACCCCTTTACGGATGATGCAACGCTTAACCTGCGTTGTGATGTGTTAGAGCCTAAAACAATGCTTGGTTACGATCGTGA
CCCGCGATCTGTTGCTAAACGCGCCGAAGCATACCTGCGTTCAACGGGCATTGCTGACACTATTTTATTTGGTCCAGAGC
CCGAGTTTTTCCTATTTGACGATGTTAAATACGGTAATACTATGCAAGGTGCATTCTTTTCCATTGATGCTAAAGAAGCG
GCGTGGAACTCAGGTACCTCCTATGAAGAAGGCAATACAGGCCACCGTCCTGGTATCAAAGGTGGTTATTTCCCTGTCGC
CCCCGTAGATTCCGCACAAAACATCCGTAGTGCTATGTGTCTTATCATGGAAGAGATGGGCCTTATTGTTGAAGCACATC
ATCATGAAGTCGCAACTGCCGGCCAAAATGAAATCGCTTGTCGTTTTAATACTATGGTTAAAAAAGCCGATGAACTACAA
ATTTACAAATACGTAGTACATAACGTTGCTCATGCCTACGGTCAAACCGCAACCTTCATGCCTAAACCGCTTGTTGGTGA
TAACGGCTCAGGTAATCACTGTCACCAGTCCCTAGGCAAAGACGGTGTTAACCTGTTCTCCGGCGACCAGTACGGCGGGC
TTTCTCAGCTAGCGCTTTATTATATTGGTGGCCTTATCAAACATGCTAAAGCACTTAATGCCTTTACTAACGCGTCAACT
AACTCATATAAACGTCTAGTGCCACATTTTGAAGCACCGGTTATGTTAGCGTACTCTGCCGGTAATCGCAGCGCATCTAT
CCGTATTCCAATCGTACCGTCACCAAAAGCGGCACGTGTTGAACTACGTTTCCCGGACCCAACGATGAACCCTTATTTAG
GTTTTTCTGCGATGCTAATGGCGGGTCTTGACGGTATTAAAAACAAGATCCACCCTGGCGAGCCTCTTGATAAAGATTTA
TACGATCTGCCTAAAGAAGAAGCGGATGCAATACCACAAGTTGCTGTTTCTTTTGAAGAAGCACTTGCTGAACTCGATGC
TGACCGTGACTTTTTAACCGCAGGAGATGTTTTCTCGAATGACTCGATTGATGCCTACATCGCCCTTAAAACAGCTGAAT
GTGAAGCTGTTTCTCGTGCAACGCATCCAAAAGAGTTCGAATTATACTACAGCGTATAA

Protein sequence : 
MSTKTVQDVLDFIKEQEVKFVDLRFTDTHGKEQHVSIPHHQANEDFFEDGKMFDGSSIAGWKGIQDSDMVLMPDPTTAVL
DPFTDDATLNLRCDVLEPKTMLGYDRDPRSVAKRAEAYLRSTGIADTILFGPEPEFFLFDDVKYGNTMQGAFFSIDAKEA
AWNSGTSYEEGNTGHRPGIKGGYFPVAPVDSAQNIRSAMCLIMEEMGLIVEAHHHEVATAGQNEIACRFNTMVKKADELQ
IYKYVVHNVAHAYGQTATFMPKPLVGDNGSGNHCHQSLGKDGVNLFSGDQYGGLSQLALYYIGGLIKHAKALNAFTNAST
NSYKRLVPHFEAPVMLAYSAGNRSASIRIPIVPSPKAARVELRFPDPTMNPYLGFSAMLMAGLDGIKNKIHPGEPLDKDL
YDLPKEEADAIPQVAVSFEEALAELDADRDFLTAGDVFSNDSIDAYIALKTAECEAVSRATHPKEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-101 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_3484 YP_944766.1 glutamine synthetase VFG1399 Protein 1e-112 52