Gene Information

Name : Ping_3479 (Ping_3479)
Accession : YP_944761.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4303114 - 4303833 bp
Length : 720 bp
Strand : -
Note : KEGG: eca:ECA0140 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease

DNA sequence :
ATGCGCCCTAGTAACCGTACTCCCGAACAAAACCGCGAAATCAAAATAACCCGTCATTATACTGACTATGCTGAAGGCTC
GGTATTAATTGAAATGGGTAATACTAAAGTACTTTGTAATGCCTCTGTTTCCGGTTCTGTGCCGCGTTTTTTAAAAGGTA
AAGGCAAAGGTTGGGTGACCGCTGAATACGCTATGTTGCCGCGTGCGACACATATCCGTAATATGCGTGAAGCCGCAAAA
GGCAAGCAGGGCGGACGGACGCTTGAAATCCAGCGCCTTATTGCACGTTCACTGCGCGCCGCTGTTGATCTCAATGCGCT
GGGTGAAAATATGATCACCGTTGATTGTGATGTGATTCAAGCCGATGGTGGCACCCGCACCGCTGCCATTACAGGCGGCT
GTATTGCCTTAGCTGACGCACTTAATTGGATGGTAAAGAAGGGTAAACTGAAAAAAAGTCCGCTGAAGCAGATGATTGCT
GCGGTTTCTGTCGGTATCTACCAAGGCACACCGGTATGTGATTTAGATTATGCGGAAGATTCCAACGCGGAAACAGACAC
GAATGTGGTGATGACCGAAAGCGGTGGTTTAATTGAGATTCAAGCAACAGCTGAAGATGGCGCATTTAGTCATGAACAGC
TGCTTAGCATGTTAAGTCTTGCCAAGGGCGGAATTGAAGCTCTTGTTGTGGAACAGAAAAAAGCACTCAACGCGGAATAA

Protein sequence :
MRPSNRTPEQNREIKITRHYTDYAEGSVLIEMGNTKVLCNASVSGSVPRFLKGKGKGWVTAEYAMLPRATHIRNMREAAK
GKQGGRTLEIQRLIARSLRAAVDLNALGENMITVDCDVIQADGGTRTAAITGGCIALADALNWMVKKGKLKKSPLKQMIA
AVSVGIYQGTPVCDLDYAEDSNAETDTNVVMTESGGLIEIQATAEDGAFSHEQLLSMLSLAKGGIEALVVEQKKALNAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 6e-57 56