Gene Information

Name : Ping_3451 (Ping_3451)
Accession : YP_944734.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 4267010 - 4267561 bp
Length : 552 bp
Strand : -
Note : KEGG: vvy:VV3164 transcription antiterminator; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein

DNA sequence : 
ATGTCAGAAGAGCTACAAAAAAAGAGATGGTATGTGGTGCAAGCATTTTCAGGCTATGAAGGGCGTGTACAAAAAACATT
ACTTGAATATATTAAATTAAATGAAATGGAAGACTACTTCGGCCAAATTCTAGTCCCAACTGAAGAAGTTGTTGAGATGC
GCGCCGGACAAAAACGTAAAAGTGAACGTAAATTCTTTCCAGGCTACGTGTTAGTTGAAATGGCGATGAATGATGATAGC
TGGCATTTAGTGAAAAGTATTGACCGCGTGATGGGATTCATCGGCGGCAGTAAAGAGCGTCCAGCACCGATTTCTCAAAA
AGAAGTGGATAATATTCTTAATCGTCTTCAAGAATCGCATGATTCTCCACGACCAAGAACATTGTTTGAAGCCGGTCAGA
TTGTACGTGTTACTGAAGGTCCTTTTGTCGACTTCACCGGAACGGTTGAGAAAGTTGACTATGAAAAGAGCCGTTTGAAA
GTATCTGTTTCTATCTTCGGTCGTGCAACACCCGTTGATTTAGACTTTTCTCAAGTAGAAAAAGACAGTTAA

Protein sequence : 
MSEELQKKRWYVVQAFSGYEGRVQKTLLEYIKLNEMEDYFGQILVPTEEVVEMRAGQKRKSERKFFPGYVLVEMAMNDDS
WHLVKSIDRVMGFIGGSKERPAPISQKEVDNILNRLQESHDSPRPRTLFEAGQIVRVTEGPFVDFTGTVEKVDYEKSRLK
VSVSIFGRATPVDLDFSQVEKDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 7e-55 59
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 7e-55 59