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Name : Ping_3428 (Ping_3428) Accession : YP_944711.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 4237748 - 4239277 bp Length : 1530 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: plu:plu3548 lysyl-tRNA synthetase (lysine--tRNA ligase) DNA sequence : ATGTCAGAGCAGAATCCAACACAAGCAGCAAAGCAAGCACCACAACAAGAGTTAAATGACATTATGGCACAACGCTTGGC CAAATTAGATGCCATGCGTGAAAAGGGACAAGCATTTCCGAATGACTTCCGCCGTGAAAATATCTCTGATGATTTACATG CACGTTATGATGATAAAACCAAAGAAGAGCTTGAAGAGCTCGCGGTTGAAGTCAGTATTGCCGGTCGTATGATGATGCGC CGTATTATGGGCAAAGCAAGTTTTGCGACTATTCAGGATATGGGCGGTCGTATTCAACTTTATGTGACCCGTGATAAGCT CCCTGAAAGTTTCTACAACACTGAATTTAAAAAATGGGATTTAGGCGATATCATTGGTGCAAAAGGGGTTTTGTTTAAAA CCCAAACTAATGAATTAAGCATTAAAGTCTCTGAAATCCGTATTCTAACTAAAGCACTGCGTCCGTTACCCGATAAATTC CATGGACTTTCTGATACAGAAGCCTGTTACCGTCAGCGCTATCTGGACTTGATTGCCAATGACAACTCGCGCAAGACATT CCTGTTACGTAATAAAATCGTTAATGCTATCCGTCAGTATTTAAATGATCGCGACTTTATGGAAGTAGAAACACCCATGC TGCAATCTATTCCCGGCGGCGCAGCGGCAAAACCCTTTGAAACTTACCATAATGCACTTTCTTTACCCATGTACCTGCGT ATTGCCCCTGAATTAAACCTAAAACGTTTAGTAGTAGGTGGTTTTGAACGTGTATTTGAAATTAACCGCAGTTTCCGTAA CGAGGGCGTTTCAACCCGCCATAACCCTGAATTTACCATGATCGAATTTTATCAGGCCTATGCAGATTATATCGATCTGA TGAATCTGACGGAAGAGATGTTACGCAGTATTGCAGAAAATGTATTAGGTTCAAGCATTGTCAACTACGGCGATCAAGTG TTTGACTTTGGCGCTGCTTTTATCCGCATGACCATGAAAGAATCCGTGCTGCAATACAATGAAGGCATTGAAGCTTCTGA ACTTGAAAGCATGGCAAGCCTTAAAGCCTTAGCCGCACGTTTCAATGTGAATATTAAAGAGAACTGGGGTGAAGGCAAAG TCTTAACCGAGATTTTTGAGGAAACAACGGAACATAAACTGCTTCAACCAACCTTTATAACAGCTTATCCGGCTGAGGTT TCACCTCTTGCCCGCCGTAATGATCAAGATCCGAGTGTGACCGATCGTTTTGAGTTTTTTGTGGGCGGACGTGAACTTGC TAATGGTTTCTCTGAACTTAATGATTCTCAAGATCAAGCTGAGCGTTTCATGGATCAGGTTGCTCAGAAAGAATCCGGTG ATGATGAGGCGATGTTCTACGATGCGGATTATATTACCGCACTTGAGCACGGTTTGCCGCCAACAGCGGGTGAAGGTATT GGTATTGATCGTCTGGTGATGTTATTTACGGACAGCCATACAATCCGTGACGTATTGTTGTTCCCGCATATGCGTCCACA AGCAAAATAA Protein sequence : MSEQNPTQAAKQAPQQELNDIMAQRLAKLDAMREKGQAFPNDFRRENISDDLHARYDDKTKEELEELAVEVSIAGRMMMR RIMGKASFATIQDMGGRIQLYVTRDKLPESFYNTEFKKWDLGDIIGAKGVLFKTQTNELSIKVSEIRILTKALRPLPDKF HGLSDTEACYRQRYLDLIANDNSRKTFLLRNKIVNAIRQYLNDRDFMEVETPMLQSIPGGAAAKPFETYHNALSLPMYLR IAPELNLKRLVVGGFERVFEINRSFRNEGVSTRHNPEFTMIEFYQAYADYIDLMNLTEEMLRSIAENVLGSSIVNYGDQV FDFGAAFIRMTMKESVLQYNEGIEASELESMASLKALAARFNVNIKENWGEGKVLTEIFEETTEHKLLQPTFITAYPAEV SPLARRNDQDPSVTDRFEFFVGGRELANGFSELNDSQDQAERFMDQVAQKESGDDEAMFYDADYITALEHGLPPTAGEGI GIDRLVMLFTDSHTIRDVLLFPHMRPQAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-145 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-82 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ping_3428 | YP_944711.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 9e-146 | 60 |
