Gene Information

Name : Ping_3426 (Ping_3426)
Accession : YP_944709.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 4234466 - 4235536 bp
Length : 1071 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pub:SAR11_1298 glycine betaine/L-proline transport ATP-binding protein

DNA sequence :
ATGCCAATACCACCTCAGCCGGTCATTAAGTGTGAGTCTGTCTATAAAATTTTTGGCGACAACGCTGCAAAAATACTGGA
ACAGTCAGACGGAAAAGTAGAAACAGCATCATTACTTGAAGCCGGATGTGTCATCGGCGTTAACAATGCCTCTTTTGAAG
TGCACAAAGGTGAGATACTCGTCATCATGGGCCTATCAGGCTCTGGTAAATCAACCCTTTTGCGCTGTATTTCACGCCTG
TTCGACACTACTGCAGGCGATATATTTATTGATGGTGAAGACCTGCTTGCCATGAATGAAAAAGAACTTATCAACATTCG
TCGTAACAAAATGGGCATGGTATTCCAAAGTTTTGCTCTCCTTCCTCACAAAACAGTGCTAGAAAATATTGCCTTACCAT
TACAAGTAAAAGGTATGAGCACCAATGACAGCATGGACCGTGCGATGGATATGGTAAATTTAGTCGAGCTCACCGGTCGT
GAGAATTACTTCCCACGCCAGCTCTCTGGTGGCCAGCAACAACGTGTCGGCATTGCTCGTTCATTGGCTGTAGAACCTGA
TATCTGGTTCCTCGATGAGCCCTTCTCAGCTCTGGACCCTCTTATTCGCAGGGAGATGCAAGACGAGTTCTTACGTTTAC
AGACTGTATTACATAAGACCATATTATTCGTTACCCACGACTTTGATGAAGCGCTCCGCCTTGCCGACCGCATCGCCATT
ATGAAAGATGGTGTCATCGAACAAATTGATACCCCGGGCAATATCGTACTCAACCCCGCCACGGAATACGTCGCCAGATT
TACCCGTGGCGTGCCACGCGAGCGCGTACTCTCCTGCCAAACCATCATGGAAGAATATGATGCCTCTGTAGAGATGAGTG
ACATCACTGTATCTGAACACGCCATTATAGACACAGTAGCAAAACCCGTGCTAACCGAGGTGCATCCAGTGGCTGTCACT
GCTGCAGAAGGTAATATTGTTGGTGTGTTAAACCGCAACATCATTATGGACGTCTTGTTTGATGAAGCTAACAGCATGCC
AGTGAATACATCAGATGAGAGCCAAACCTAA

Protein sequence :
MPIPPQPVIKCESVYKIFGDNAAKILEQSDGKVETASLLEAGCVIGVNNASFEVHKGEILVIMGLSGSGKSTLLRCISRL
FDTTAGDIFIDGEDLLAMNEKELINIRRNKMGMVFQSFALLPHKTVLENIALPLQVKGMSTNDSMDRAMDMVNLVELTGR
ENYFPRQLSGGQQQRVGIARSLAVEPDIWFLDEPFSALDPLIRREMQDEFLRLQTVLHKTILFVTHDFDEALRLADRIAI
MKDGVIEQIDTPGNIVLNPATEYVARFTRGVPRERVLSCQTIMEEYDASVEMSDITVSEHAIIDTVAKPVLTEVHPVAVT
AAEGNIVGVLNRNIIMDVLFDEANSMPVNTSDESQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 2e-64 49