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Name : clpB-2 (Ping_3263) Accession : YP_944549.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4027274 - 4029847 bp Length : 2574 bp Strand : - Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: vch:VC0711 clpB protein DNA sequence : ATGCGCATGGATAAATTAACCAGTAAGTTTCAATTAGCAGTTGCCGATGCTCAATCCTTAGCACTCGGGCATGATAACCA ATATATTGAACCCATTCATATTATGCTTACTCTCCTAAATCAAGATGGTGGTTCACTGCGGCCAATATTTGCAGATTTGG AGGTGAACCTGAGTGCCTTACGATTAGAACTTTCCACTGAGCTGGATCGCCTTCCAAAAGTAACCGGTATCGGCGGTGAT ATTCAGATATCCGCTCAACTTAATACGTTGTTTAATCTGTGCGACAAATATGTCCAAAAATCCCAGGATAAATTTATTTC TTCAGAACTTTTTTTAGTCGCGGCTTGTGAAGATAAGGGGCGTTTAGGTGACATTTTAAAAAAATTCGGTTTGAATAAAC AAAAAGTTGAAAAATCGATTGAAAAAATTCGCAATGGCCAAAATGTCACGGATCAGGATGCTGAGGGGGTAGAGAAAGCA TTAGTTAAATATACGATTGATTTAACCGAGCAGGCTGAGCAGGGCAAGTTGGATCCGGTCATTGGTCGCGATGATGAAGT ACGTCGTATGATTCAGGTGCTGCAACGCCGGACTAAAAATAATCCGGTTATTATCGGTGAGCCGGGTGTGGGTAAAACCG CTATTGTCGAAGGTCTGGCCCAGCGTATTATTAATGGCGAAGTGCCGGAAGGTTTAAAAAATAAACGGGTATTGTCACTG GATATGGGGGCATTAATTGCCGGCGCAAAATACCGCGGTGAATTTGAAGAAAGATTAAAAGCGGTATTGAGTGAGTTATC TAAAGAAGAGGGAAAAATCATTCTCTTTATTGATGAATTACATACTATGGTGGGTGCGGGCAAAGCGGATGGTGCGATGG ACGCGGGTAATATGTTAAAACCGGCCCTGGCGCGGGGAGATCTGCACTGTGTAGGGGCAACTACTCTGGATGAATACCGT AAATATATTGAAAAAGATGCCGCCCTTGAACGCCGTTTCCAAAAAGTGCTGGTCGATGAACCAACGGTTGAAGATACTAT TGCCATTTTACGTGGTTTAAAAGAGCGTTATGAACTCCATCATAAGGTCGAAATTACCGATCCTGCGATCGTAGCGGCAG CGACACTTTCCCATCGTTATATTGCCGATCGCCAGCTCCCCGATAAAGCGATTGACCTGATTGATGAAGCGGCATCAAGC ATCCGTCTGCAGATGGACTCTAAGCCAGAAGAGTTAGATAAGTTAGAGCGGAAAATCATCCAGTTAAAGTTAGAAGAAAA GGCGCTGCAAAACGATACTGATGAAGCCAGTATTAAACGTCTAGCTGATTTAGAAAGCGCTCTAGCGGAAAAAGAACAGG CATTTTTGGCCTTAGATAAAGTATGGCGCGCCGAAAAAGCCGCTCTGTCAGGTACGCAGAATATTAAACAATCCATCGAA CAGGCACGTTTAGATCTTGAAGTTGCCAGCCGGGCAGTCGATTTAACCCGAATGTCTGAATTGCAGTACGGTGTAATCCC TGCATTGGAAAAACAGTTAGTACAAGCAGCACAAGCTGAAATGCAGGAGACTACCCTATTAAAACATGCGGTAACCGAAA ATGAAATTGCTGAAATCCTTGCTCATTGGACGGGTATTCCGGTGGCTAAAATGCTTGAAGGGGAACGCGATAAACTCCTT AAAATGGAAACGCATCTGCATTCCCGGGTGATAGGCCAAAACGAAGCCATTGACGCTATCGCTAATGCTATTCGCCGCAG CCGAGCGGGGTTAAGCGATCCCAATCGTCCGATCGGCTCTTTCCTCTTTTTAGGGCCAACGGGGGTGGGTAAAACTGAAT CCTGTAAAGCATTAGCTAATTTCCTCTTTGACAGTGAGGACAATATGGTGCGCATTGATATGTCTGAGTTTATGGAAAAA TTTTCAGTGTCCCGTTTAGTGGGGGCACCTCCCGGATATGTAGGATATGAAGAGGGTGGATATTTAACGGAAGCTGTGCG TCGTAAACCTTATTCAGTGATTTTATTAGATGAGATAGAAAAAGCCCACCCAGACGTGTTTAATATTTTATTACAGGTAT TAGATGACGGACGTTTAACCGATGGACAAGGGCGTACCGTTAGTTTCCGTAATACCGTTATTATCATGACCTCAAATATC GGTTCAGATATTATTCAGGAGAAGTTTGATAAAGTCAGCTATGATGAAATTAAATCTTATCTGCTGGATATATTAGCGAG CCAATTTAAACCCGAATTTTTAAATAGAATAGATGAAACCGTGGTTTTCCATCCATTAGGCAGGGAGCACATTAAATCGA TTGCAGAGATTCAATTACGATCTTTACAAAAACGTCTTACTGATAAAGATTATCTGGTCACCTTTACTGACCAAGCTATC CAATTGTTAGTGGACGCGGGTTATGATCCCGTTTATGGCGCCAGACCTTTAAAACGTGCCATTCAGCAATTGCTGGAAAA CTCCTTAGCGCAGGATATCCTGTCTGGACGTTTGCAAACGGGTAAAGAGATACGGGCGGAGGTTATTGATGGAAAAATTG AATTTGTGCAATAA Protein sequence : MRMDKLTSKFQLAVADAQSLALGHDNQYIEPIHIMLTLLNQDGGSLRPIFADLEVNLSALRLELSTELDRLPKVTGIGGD IQISAQLNTLFNLCDKYVQKSQDKFISSELFLVAACEDKGRLGDILKKFGLNKQKVEKSIEKIRNGQNVTDQDAEGVEKA LVKYTIDLTEQAEQGKLDPVIGRDDEVRRMIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSL DMGALIAGAKYRGEFEERLKAVLSELSKEEGKIILFIDELHTMVGAGKADGAMDAGNMLKPALARGDLHCVGATTLDEYR KYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHKVEITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS IRLQMDSKPEELDKLERKIIQLKLEEKALQNDTDEASIKRLADLESALAEKEQAFLALDKVWRAEKAALSGTQNIKQSIE QARLDLEVASRAVDLTRMSELQYGVIPALEKQLVQAAQAEMQETTLLKHAVTENEIAEILAHWTGIPVAKMLEGERDKLL KMETHLHSRVIGQNEAIDAIANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTESCKALANFLFDSEDNMVRIDMSEFMEK FSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVSFRNTVIIMTSNI GSDIIQEKFDKVSYDEIKSYLLDILASQFKPEFLNRIDETVVFHPLGREHIKSIAEIQLRSLQKRLTDKDYLVTFTDQAI QLLVDAGYDPVYGARPLKRAIQQLLENSLAQDILSGRLQTGKEIRAEVIDGKIEFVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-100 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 7e-101 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 5e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB-2 | YP_944549.1 | chaperone ClpB | VFG2084 | Protein | 7e-105 | 42 |
