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Name : Ping_3157 (Ping_3157) Accession : YP_944444.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Unknown Product : oligopeptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3886214 - 3887977 bp Length : 1764 bp Strand : - Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: noc:Noc_2773 ABC transporter, ATPase subunit DNA sequence : ATGATAATGAATAATAAAAGCATGAACAGTAACTTACTTGAAATTCGCAATCTTGGTATCGATTTCAATACCGATGAGGG TTTAATGCGCGCGGTTGACGGTATTGATCTTAATATTCGTCCCGGTGAGGTAATGGGGTTGGTTGGCGAGAGTGGTTCTG GTAAGTCAATTACCGCCAAAAGTATTATGCAATTATTGCCGGGTAACGCCATTATTGCGCCTCAGAGCGAACTGCGAATT CGGCACGACAGTCAGGATATCGATATTCTGAAACTCCGTGGTCGGGATTTACGTAAAGTGCGCGGCGGTTTGGTTTCCAT GATTTTTCAGGAGCCCATGGCAAGTTTTGCACCGGCGATTCGTATTAGTGACCAGATAGTCGAAACCATGCAGATTCACT TGGGTTATAGCCGTGATAAGGCGCGCCGGGTGGGCATAGAATTATTTGAACGTGTTGGTATCGTTGACCCAGCTAGGCGG TTTGACCAGTACGTATTTGAATTATCCGGCGGTATGCGTCAACGCGCCATGATTGCGATGGCATTATCGACCAAGCCTAA ATTACTGATTGCTGATGAGCCGACTACCGCCTTAGATGTAACAATTCAGGCACAAGTGCTGGACTTGATGCGCGAGTTAC GCGAGGAAATGGGAATGGCTATGCTGTTTATTACCCATGATCTGGGCGTTATTTCAAAGATTGCCGATAACGTGACAGTA ATGCGTCAAGGCAACATTGTTGAGGCGGGTAATGCAGACCAAGTATTGTTCCAGCCACAGCATCATTATACCCAGCGCCT GCTGGCGGCTTTACCTAACCTCGATAACCTGCCTGAAGCGCCAAAGGAAAAACCACAGCCGCTGCTGAGTATTAATAACT TATCAATCAGTTACCCATTAGGTGGAAGCAGCCATAAACAGGAAATGTTTAAGGCGGTCAAAAATATCTCGTTGGATCTC CCCGAAGGGCAAATTATCGGTTTGGTGGGTGAAAGCGGCTCAGGTAAAACGTCTTTAGGTAAAGCCCTGTTAGGAGCTGC ACCTATCAGTGAGGGAAGTGTTAAATATCATAACACCAAAAAGAAGGTTCATTTTGGTGCCAACAAACGTTTAAAGCGTA AGCGTTTATCAAAAACAGCCCAGATGGTATTTCAAGATCCGCACAGTTCGCTAAATCCGCGCATGACCATTCGGGACATT ATTGCTGAGCCTTTGGAAGCCATGAAATTAACCTCCAGCAGAGAAGAAACCGATCGACGTATAATAGAAGTAGCAAAACG CTGCCATATTGAAGTTGCGCATTTACGGCGTTTTCCCCATGCTTTTTCGGGTGGACAAAGACAGCGGATCAGCATTGCCC GGGCACTAGTCTGTAAGCCCAAATTTATTGTGGCTGATGAATCAGTGGCAGCCTTGGATGTGTCGATTCAGGCTGAAATT CTCGCTTTGTTAAAAGAGCTAAGGACAGAGTTAGGTCTGACTATTTTGTTTATCTCCCATGACCTGAGTGTGATTGCTAA TTTATGTGATTGGGTTTGTGTAATGAAAGACGGCTCAATGGTTGAACAGGGAACGGTGCGCCAGATTTTTCTTAAACCCC AGCAGCCTTATACTCAGACATTAATCGCTTCTATTCCGTTGTTAGAATCGCCACAGGCCCAGCTTGAACCTTTTCCGGAA TATACCGCGCCAAAGGCGCAGCGGCAGGGCCCTTTTATAATGAAAGATAACCAAGAGCAGACTATTGGGAGAAAGCGTGC TTAA Protein sequence : MIMNNKSMNSNLLEIRNLGIDFNTDEGLMRAVDGIDLNIRPGEVMGLVGESGSGKSITAKSIMQLLPGNAIIAPQSELRI RHDSQDIDILKLRGRDLRKVRGGLVSMIFQEPMASFAPAIRISDQIVETMQIHLGYSRDKARRVGIELFERVGIVDPARR FDQYVFELSGGMRQRAMIAMALSTKPKLLIADEPTTALDVTIQAQVLDLMRELREEMGMAMLFITHDLGVISKIADNVTV MRQGNIVEAGNADQVLFQPQHHYTQRLLAALPNLDNLPEAPKEKPQPLLSINNLSISYPLGGSSHKQEMFKAVKNISLDL PEGQIIGLVGESGSGKTSLGKALLGAAPISEGSVKYHNTKKKVHFGANKRLKRKRLSKTAQMVFQDPHSSLNPRMTIRDI IAEPLEAMKLTSSREETDRRIIEVAKRCHIEVAHLRRFPHAFSGGQRQRISIARALVCKPKFIVADESVAALDVSIQAEI LALLKELRTELGLTILFISHDLSVIANLCDWVCVMKDGSMVEQGTVRQIFLKPQQPYTQTLIASIPLLESPQAQLEPFPE YTAPKAQRQGPFIMKDNQEQTIGRKRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-89 | 41 |
