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Name : Ping_0292 (Ping_0292) Accession : YP_941757.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Unknown Product : oligopeptide/dipeptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 379971 - 381563 bp Length : 1593 bp Strand : + Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP_4150 peptide ABC transporter, ATP-binding protein DNA sequence : GTGAGTAGCAAAAATGAATTATTAAAAATAGAAAATCTGGCGGTCAGTTTTGGCGATAAAAATATTGTCAGTGGGGTAAG TTTTAGCCTTGATAAAGGGCAAACATTAGCGATTGTGGGTGAGAGTGGTGCGGGTAAGTCTCTGGTTGCCCTCTCTATTC TGCAGTTATTACCCTATCCCCACGCACACCACCCCGCGGGTGAAATCTATATAGATGGTTTGCAGTTAGTGGGAAAAGAG GCCGCAGTACTTGAAACTATTCGCGGCAATAAAGTGGGCATGATTTTCCAGGAGCCCATGACCTCACTCAACCCTCTGCA TACGGTGCAAAAGCAGATTGCTGAAACTTTATTGATCCATAAAGGACTAACAGGTAAGGCATCCCATGCGCGTATTATTG AGTTATTAGATTTGGTGGGCATTGAAGCGCCGGAGACACGTTTAGCTTCCTATCCTCATGAGTTATCCGGCGGACAACGT CAACGCGTTATGATCGCAATGGCGCTCGCTAACGAGCCAGAACTGCTGATTGCCGATGAGCCGACCACTGCCCTTGATGT GACCATTCAAAGGCAAATTTTGGATCTGTTAAAATCATTACAAAAACGTCTTAATATGGCGGTGTTAATCATTACCCATG ATCTTCATGTTGTTAAGCATATTGCCGATTCAGTATTAGTTATGCACGATGGGAAAAGCATAGAATATAGCAGTAAAAAT GCGCTTTTCTCAAACCCTAAGCACGAATATACTAAACTCTTATTAAATGCCGAACCTGCCGGTGAGATGACGGAATTAAC GGCACCCCAACTTATTTTAAGTGCGGCTAATATTAATGTGAGTTACCCATTAAAGAAAAATTTTTGGGGAAAAACCACCC GTAGTTTACAAGCTGTTAAAAATGTCAGTTTACAGATTCATCAGAGTGAAACGGTTGCAATAGTGGGGGAAAGCGGCTCC GGGAAAAGTACCTTAGCGCAAGCGATACTGCAGCTTAATAAAAGTACTGGAGACGTTGTTTATCTGGGTGAAAAAATAAA TGCAATTAAACATAACGAGCTACAAAAATTAAGGAAAAAATTACAGATAGTTTTTCAGGATCCCTTTGCAAGTTTAAGTC CGCGTATGTCTGTTCGCGATATTATTGCCGAAGGGCTGCAGGTTCATCAACCAAAAAAACCATTATCCAGTCAAGAAATA GATGCCCAAGTTGAGCAAGTTTTACAACGAGTTGGCCTGGAAAAAGACAGTGGCTTGCGTTACCCCCATGAGTTTTCGGG GGGGCAGCGTCAACGAATCTCAATTGCGCGAGCATTGATTTTAAAACCGCAGTTAATTGTATTAGATGAGCCAACGTCAG CCTTAGACCGCAGTATCCAGAAACAGATATTAGCACTGTTAATCTCACTGCAAAAAGAACTCGGCTTAAGTTATCTTTTT ATCAGTCATGATTTGTCTGTTGTCCGCACTATTAGCCATCGTGTATTAGTGATGTACAATGGTGAAATTGTTGAACAGGG GACCACCAAAAAAATATTTGCACAGCCTCGCCATGAGTACACAAAAATACTATTATTATCCTCTGTTTTGTGA Protein sequence : MSSKNELLKIENLAVSFGDKNIVSGVSFSLDKGQTLAIVGESGAGKSLVALSILQLLPYPHAHHPAGEIYIDGLQLVGKE AAVLETIRGNKVGMIFQEPMTSLNPLHTVQKQIAETLLIHKGLTGKASHARIIELLDLVGIEAPETRLASYPHELSGGQR QRVMIAMALANEPELLIADEPTTALDVTIQRQILDLLKSLQKRLNMAVLIITHDLHVVKHIADSVLVMHDGKSIEYSSKN ALFSNPKHEYTKLLLNAEPAGEMTELTAPQLILSAANINVSYPLKKNFWGKTTRSLQAVKNVSLQIHQSETVAIVGESGS GKSTLAQAILQLNKSTGDVVYLGEKINAIKHNELQKLRKKLQIVFQDPFASLSPRMSVRDIIAEGLQVHQPKKPLSSQEI DAQVEQVLQRVGLEKDSGLRYPHEFSGGQRQRISIARALILKPQLIVLDEPTSALDRSIQKQILALLISLQKELGLSYLF ISHDLSVVRTISHRVLVMYNGEIVEQGTTKKIFAQPRHEYTKILLLSSVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-86 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-86 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-86 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-86 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-93 | 41 |
