Gene Information

Name : Ping_2958 (Ping_2958)
Accession : YP_944259.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3648122 - 3648796 bp
Length : 675 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vfi:VFA1043 ABC transporter ATP-binding protein

DNA sequence : 
ATGTCATTATCCATTATAAAAGCAATATCAGTGAGTAAATCCGTTATTTCCAATGGAAACGAATTATCTATTCTAAAAGA
TATCACATTTGACGTCGTTGCGGGTGAGACTGTTGCCATTGTTGGCACCTCCGGGGCGGGTAAATCCACCTTAATGGCTT
TGTTGGCGGGATTAGATATTGCCAGCTCAGGTGAAATTGAATTACTGGATCAACCTTTATCACAATTGAATGATGAGCAA
CGAGCGCAAATTCGCAGCGAATCAATCGGCTTTGTTTTTCAGAGCTTTTTGCTAATACCATCGTTATCTGCGTTAGAAAA
TGTGACCTTACCGGCTATTTTACGTGGGGAAGGGGAAGATATAGAGAAAGCTAAACAGCTACTTGAATCGGTTGGACTGA
CGGGGCGTGAAACGCATTTGCCTGACCAGTTATCCGGTGGCGAGCAGCAACGAGTCGCATTAGCCAGGGCTTTTATGACC
CAGCCAAAAATCCTCTTTGCCGATGAGCCAACCGGCAATTTAGATGAGCATACGGCAGAAAATATTATTGAACTTTTATT
TGAAATGAATCGGGATCATGGCACGACGTTAGTATTAATAACCCATGACACTAATTTAGCCAAACGCTGCGATCGTACGC
TCTCTATTCACGCCGGCCAGTTGCAGGAGGTCTAA

Protein sequence : 
MSLSIIKAISVSKSVISNGNELSILKDITFDVVAGETVAIVGTSGAGKSTLMALLAGLDIASSGEIELLDQPLSQLNDEQ
RAQIRSESIGFVFQSFLLIPSLSALENVTLPAILRGEGEDIEKAKQLLESVGLTGRETHLPDQLSGGEQQRVALARAFMT
QPKILFADEPTGNLDEHTAENIIELLFEMNRDHGTTLVLITHDTNLAKRCDRTLSIHAGQLQEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_2958 YP_944259.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-39 46
Ping_2958 YP_944259.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-36 45
Ping_2958 YP_944259.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-35 43
Ping_2958 YP_944259.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-33 41
Ping_2958 YP_944259.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-36 41