Gene Information

Name : Ping_2879 (Ping_2879)
Accession : YP_944182.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 3559045 - 3560454 bp
Length : 1410 bp
Strand : +
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
GTGAGAAAAACTAAAATAGTTTGTACTATTGGTCCAAAATCAGAATCAAAAGAGATGTTAGGTAAATTAGTCAAAAATGG
CATGAATGTAATGCGCCTTAACTTCTCGCACGGTGATTTTAACGAACATGGTGGTCGAATTAATACTATCCGTGAAATTT
GCCGAGAAACGGGTAAAAATGTTGCCATTTTATTAGATACCAAAGGTCCTGAAATTCGTACAGTTAAACTAACCAACGGT
GCTGATGTATTATTAACGGCAGGACAAGAGTTCACTTTAACAACGGATCAAACTGTTGTGGGTGACAACACTGTGGTAGC
CGTAACTTATGAAAATCTAACCAATGATTTAGCGGTAGGTAACACGGTATTACTTGATGACGGCCTAATTGAACTAACCG
TTAAACGTATTACCGATACAGAGGTTATCTGTGATGTTATGAACACCGGTGAACTGGGCGAAAATAAAGGCGTTAACCTT
CCAGGTGTTAAAGTTCAGCTGCCTGCTCTGTCTCCTAAAGATAAAGGCGATTTAATATTTGGTTGTGAACAACAAGTTGA
TTTTATTGCAGCATCATTTATTCGTAAAAAAGAAGACGTATTGGAAATCCGTGAGTTATTAAAAGCTCACGGTGGCGAAA
AAATTCACATCATCTCTAAAATAGAAAACCAAGAAGGTGTTGATAACTTTGATGAAATCCTAGCAGCTTCAGACGCTATT
ATGGTCGCTCGTGGTGACTTAGGCGTTGAAATTGCAGTTGAAGAAGTGATCTTCGCACAAAAAATGATGATCGAAAAAGC
AAATGCTGCTCGAAAGCCTGTTATTACAGCGACACAAATGCTTGATTCAATGATCAAAAATCCACGACCAACGCGTGCTG
AAGCGGGCGATGTTGCCAATGCTATCTTAGATGGCACTGATGCAGTCATGCTTTCAGGTGAAAGTGCTAAAGGAAAATAC
CCTGCAGAAGCGGTTGAAATTATGGCAACTATCTGTGAGCGAACCGATCAAGTCATGCATGTCAGAGTTGATAATATTAC
AAAAGATATCCGTATCACAGAAGCAGTATGCAGCGGTGCAGTTAACAATGCAGAGCAACTAGATGCTAAATTAATCATAG
TAGCAACGGGTGCCGGCAAGTCTGCACGCTCTTTACGTAAATACTTTCCAAGGACTCAAATCCTGGCGTTAACCAGTAAT
CCAAAAACAGCACAACAACTTGCATTAGTAAAAGGGGTTTCTGCTAAAATTGTTGAAGCTCAAAATTCAATGGAAGAGTT
CTACCAACTTGGTATGGATATGAGTAAACAGCTTGGTCTTGTTACTGCTGGTGATAAAGTCATAATAGTCGCTGGTGCGC
TTGTGGCTTCCGGTACGACAAACACTTCTTCTGTACACGTTATTGTTTAA

Protein sequence :
MRKTKIVCTIGPKSESKEMLGKLVKNGMNVMRLNFSHGDFNEHGGRINTIREICRETGKNVAILLDTKGPEIRTVKLTNG
ADVLLTAGQEFTLTTDQTVVGDNTVVAVTYENLTNDLAVGNTVLLDDGLIELTVKRITDTEVICDVMNTGELGENKGVNL
PGVKVQLPALSPKDKGDLIFGCEQQVDFIAASFIRKKEDVLEIRELLKAHGGEKIHIISKIENQEGVDNFDEILAASDAI
MVARGDLGVEIAVEEVIFAQKMMIEKANAARKPVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY
PAEAVEIMATICERTDQVMHVRVDNITKDIRITEAVCSGAVNNAEQLDAKLIIVATGAGKSARSLRKYFPRTQILALTSN
PKTAQQLALVKGVSAKIVEAQNSMEEFYQLGMDMSKQLGLVTAGDKVIIVAGALVASGTTNTSSVHVIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-162 72
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-162 72
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-162 72
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-162 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_2879 YP_944182.1 pyruvate kinase VFG0479 Protein 5e-163 72