Gene Information

Name : Ping_2539 (Ping_2539)
Accession : YP_943859.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 3103173 - 3104693 bp
Length : 1521 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: cps:CPS_1885 aldehyde dehydrogenase family protein

DNA sequence : 
ATGATCTATTCAAATCCAGGCAGTGAAGGTTCTGTCGTTACATTTAAAGAAAAATATGAAAACTTTATCGGCGGAGAATG
GGTTGCCCCTGTGAAAGGTAATTATTTTAATAATACGACACCCGTAACAGGCGAAGTCATCTGTCAGATTCCGCGTTCGA
GCGCTGAAGATATCGACTTAGCCATTGATGCCGCACATGCAGCCAAAGATGCCTGGGGACAGACTTCCGTGCAGGATCGT
GCCAATATCTTACTGAAAATAGCCGATCGTATGGATGCCAACCTTGAACTTCTTGCTGTTGCTGAAACTTGGGATAACGG
TAAATCGGTTCGTGAAACAATGGGGGCCGACCTGCCTTTAAGTTCCGATCACTTTCGTTATTATGCCGGCTGTATTCGTG
CACAGGAAGGTACCTTGTCACAGATAGATAACGATACTGTTGCTTATCATTTTCATGAACCTCTTGGTGTTGTCGGCCAA
ATTATTCCATGGAATTTCCCGATCTTAATGGCTTCATGGAAACTGGCACCTGCCTTAGCTGCTGGTAACTGTGTAGTGCT
TAAACCTGCAGAACAAACACCCGTCAGTATTTTATTGCTGATGGAATTAATTGCTGATCTGCTGCCGGCTGGTGTGTTAA
ATATTGTTAATGGCTACGGTAAAGAAGCTGGCGAAGCCTTAGCGACCAGCAAACGTATTGCTAAAATAGCCTTTACCGGT
TCAACACCCGTTGGTGAGCATATTCTAAAATGCGCTGCAGAGAATATGATCCCCTCTACCGTTGAGCTTGGTGGCAAATG
TCCAAATATATTTTTCGGTGATATCACTCAACATGAAGATGATTATCTGGATAAATGTGCGGAAGGTTTTGTACTGGGAT
TCTTTAACCAGGGAGAAGTCTGTACTTGTCCTTCCCGTGCGTTGGTTCAGGAAGACATTTTCGATGAGTTTATGGTAAAA
GTCATTGAAAAAGCGAAAAAGATTGTTCGCGGAAATCCACTGGACAGCAACACTATGGTGGGTGCTCAGACATCAGAGCA
GCAGTTTGATAAAATCATAAGTTATCTGGATATAGGCGTAACAGAAGGGGCTAAAGTACTGACCGGTGGTGGTAAAGAAG
TCCTTGATGGCACACTTAATAGTGGTTTTTACATCCAGCCGACCATTATGCAGGGTGATAACTCTATGCGGATTTTCCAG
GAAGAAATATTCGGACCAGTTATCGCGGTAACCACCTTTAAAGATGAAGCAGAAGCTCTGGCAATTGCCAACGACAGTAT
TTTCGGTTTAGGCGCAGGAGTTTGGACACGAGATGCCAACCTTGCACATCGAATGGGCCGAGGCATTCAGGCCGGACGAG
TATGGACTAACTGTTACCATTTATACCCAGCGCATTCAGCTTTCGGTGGATATAAAAAATCCGGCATCGGCCGTGAAACA
CATAAGATGATGCTCGATCATTACCAGCAGACTAAAAACTTATTAGTAAGCTACAGCACATCACCGATGGGTCTGTTTTA
A

Protein sequence : 
MIYSNPGSEGSVVTFKEKYENFIGGEWVAPVKGNYFNNTTPVTGEVICQIPRSSAEDIDLAIDAAHAAKDAWGQTSVQDR
ANILLKIADRMDANLELLAVAETWDNGKSVRETMGADLPLSSDHFRYYAGCIRAQEGTLSQIDNDTVAYHFHEPLGVVGQ
IIPWNFPILMASWKLAPALAAGNCVVLKPAEQTPVSILLLMELIADLLPAGVLNIVNGYGKEAGEALATSKRIAKIAFTG
STPVGEHILKCAAENMIPSTVELGGKCPNIFFGDITQHEDDYLDKCAEGFVLGFFNQGEVCTCPSRALVQEDIFDEFMVK
VIEKAKKIVRGNPLDSNTMVGAQTSEQQFDKIISYLDIGVTEGAKVLTGGGKEVLDGTLNSGFYIQPTIMQGDNSMRIFQ
EEIFGPVIAVTTFKDEAEALAIANDSIFGLGAGVWTRDANLAHRMGRGIQAGRVWTNCYHLYPAHSAFGGYKKSGIGRET
HKMMLDHYQQTKNLLVSYSTSPMGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-164 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-164 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-164 65
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-154 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-163 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_2539 YP_943859.1 aldehyde dehydrogenase VFG0082 Protein 3e-154 65