Gene Information

Name : Ping_0243 (Ping_0243)
Accession : YP_941709.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 312326 - 312550 bp
Length : 225 bp
Strand : +
Note : PFAM: Prophage CP4-57 regulatory; KEGG: vvy:VV2250 predicted transcriptional regulator

DNA sequence :
ATGAAAATATTACGCTTAGCAGACGTTGTTAAGAAAACCGGACTTTCACGTGCGATGCTATACAAATTAATGAAAGACGG
ACGTTTTCCATTAAACCTTCACATCTCCATGAGATCTGTTGGTTGGGTTGATTCTGAAGTAGAAATTTGGATGGAAAATA
GACTTGAAATGCGTGCTACAAAAGAGGGGAAAGTAACAGCAGGAGGGGATGTATGTTTGCAATGA

Protein sequence :
MKILRLADVVKKTGLSRAMLYKLMKDGRFPLNLHISMRSVGWVDSEVEIWMENRLEMRATKEGKVTAGGDVCLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 2e-11 49
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 3e-11 48
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 5e-10 44
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 44
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 5e-10 44
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 1e-10 44
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 9e-09 43
unnamed CAA21398.1 - Not tested HPI Protein 1e-08 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_0243 YP_941709.1 phage transcriptional regulator AlpA VFG1118 Protein 1e-10 44