Gene Information

Name : Ping_2478 (Ping_2478)
Accession : YP_943806.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 3029483 - 3030340 bp
Length : 858 bp
Strand : +
Note : KEGG: pha:PSHAa2990 hypothetical protein

DNA sequence : 
ATGAACCAGATAGATAAAAGCACAATTCGCTGGGAAGTTTTATTACGTTACCAACTTATTGAAATTATTGCCTTATGGGA
AGGCCGCATTATTACCAACCACCTGTGCAGTGCTTTTGGTATCGGTCGGCAACAAGCATCAAAAGATATCAATGCTTATC
GTTCATGCTGCCTGGAAAACCTTTCTTATGATAAACGAGCTAAAGGCTACGTACCCGGTGATAAATTTAAACCATACTTT
ACCCAAGGCACTGCCAATGAATACCTGCATCTGTTAAATGCTAATAAAGCATTAGCCAGCGTTTTTGAAAGCAGTGACTT
TCCGGTTTCTTATACTGAAGTAATGGAGGTTCCGAACCGAATTATCACGCCGGAAATTCTTCGTCCTATTACCAAAGCCT
GCCGTGAAAAACTGCGTTTAGATATCACCTACTGCTCGATGACTAGCCCGGAGGGTGAAGATCGTATTATCTCTCCACAT
ACCTTAGTTTATAGCGGTGTACGCTGGCATGTCCGCGCTTATTGTGAAAAGCATAAAGATTACCGCGATTTTGTTATTAA
CCGAATAAAATCGATTGATGATACATTAGGTAAATCGATTGAGAACAGTACAACAGATACGCGTTGGCACAACTTTGTTA
ATGTGCAACTGATACCGAACCCTCAATTTACTATCAGTCAGCAAAGCTTGATTGCCCGTGACTATGCCATGCTGGATAAT
TTATTAACGCTGAATGTCCGCAGCTCATTAGTTCAATATACGCTGGATCAGCTTAATGTTGCCACTCAAGCTGACGAACA
GGCATCCGCCAATTTAGTTTTACAAAATAGAGATGAATTAAAGGCGTTTTTGCAGTAG

Protein sequence : 
MNQIDKSTIRWEVLLRYQLIEIIALWEGRIITNHLCSAFGIGRQQASKDINAYRSCCLENLSYDKRAKGYVPGDKFKPYF
TQGTANEYLHLLNANKALASVFESSDFPVSYTEVMEVPNRIITPEILRPITKACREKLRLDITYCSMTSPEGEDRIISPH
TLVYSGVRWHVRAYCEKHKDYRDFVINRIKSIDDTLGKSIENSTTDTRWHNFVNVQLIPNPQFTISQQSLIARDYAMLDN
LLTLNVRSSLVQYTLDQLNVATQADEQASANLVLQNRDELKAFLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 9e-63 47
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 9e-63 47
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 1e-61 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_2478 YP_943806.1 hypothetical protein VFG1105 Protein 4e-63 47