Gene Information

Name : Ping_2463 (Ping_2463)
Accession : YP_943793.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3014029 - 3015273 bp
Length : 1245 bp
Strand : +
Note : PFAM: phage integrase family protein; KEGG: cps:CPS_2917 site-specific recombinase, phage integrase family

DNA sequence : 
ATGGCAATAAAAGTTAAGCCTTTAACGGCTACACAAGTCCTTCAAGCTAAACCAAAAGACAAAGTTTATAACCTGGGAGA
TGGTGATGGCTTATCTTTAAAGATTTTGCCGTTAGGCTCAAAGTTGTGGCGCTTTTCTTATTATCGGCCAGTCAGTAGGA
AAAGAGCGCATTTAGCTTTAGGTATATATCCTTCGGTATCTTTAGCCAAAGCTAGAACCAAAGCGATTGAAGCCAGAAAA
CTGCTTGCTGATGGCATTGATCCTAAAGAACAAAGAGACACCACACTTAAAGCCCAACAAATTGAGCTTTCAAATACACT
CCAAGCTGTATTTGAAGATTGGTTTGCCGTTAAAAAAACCAGCATTAAAGAATTAACAGCAAAAAAGTTAAAACAACGCT
TAGATAAATACCTGTTAACTTATCTTGGCAAATTCCCTATTGCTGAAATCACCGCCCCACAAGCGATCAAAATCCTGCAG
CCAGTTGCTAACCAAGGCAAACTTGAAACTGTTGGCAGGCTTTGCCGTAATCTTAATGAAATAATGACATTTGCAGTTAA
CACCGGAATTATAGAGCACAACAAGCTTGCCGGTATTGGCAAAGCGTTTGCAACCGCTCAAGTCACTAACCAAGCTTCGC
TGAAGCCAGAAGAGCTACCAGAGCTACTCATAGCCCTTAACTACGCCAATATAAAACTTATCACTCGCTGTTTGATTGAA
TGGCAACTGCATACTATGACCCGCCCTGCTGAAACAGCTGGTGCTCGCTGGGGTGAAATTGATAAAGAAAATAAACTTTG
GCACATCCCACCCGAACGCATGAAAAAAGGCAGGCCGCATACAGTCCCCCTAACAACACAAACACTCGCGCTGTTAGAGA
CAATTGATTCAATTACGGGTGACAGTGAATATATCTTCCCGGCAGATAAAACTAATAAAAAACATATTTGCAAGGAGACA
GCGAACAAAGCACTCGCAAGAATGGGCTTTAAAGGTCGCCAGACGTCACACGGATTACGTGCCCTGGCAAGTACCACCCT
GAATGAGCAAAACGTCTTCGATGCAGACGTGATTGAGGCCGCCCTTTCACACGTTGATAAAGATAAAGTGAGAAGTGCTT
ACAACCGCACTGACTACCTTGAGCGCCGCCGCGTACTAATGGGCTGCTGGAGTGATCATATTGAAGAGGCATCGAAAGGA
TCTAACTCAATCACCGGATTAAAAGCGCTAAAGATTGTTAATTAA

Protein sequence : 
MAIKVKPLTATQVLQAKPKDKVYNLGDGDGLSLKILPLGSKLWRFSYYRPVSRKRAHLALGIYPSVSLAKARTKAIEARK
LLADGIDPKEQRDTTLKAQQIELSNTLQAVFEDWFAVKKTSIKELTAKKLKQRLDKYLLTYLGKFPIAEITAPQAIKILQ
PVANQGKLETVGRLCRNLNEIMTFAVNTGIIEHNKLAGIGKAFATAQVTNQASLKPEELPELLIALNYANIKLITRCLIE
WQLHTMTRPAETAGARWGEIDKENKLWHIPPERMKKGRPHTVPLTTQTLALLETIDSITGDSEYIFPADKTNKKHICKET
ANKALARMGFKGRQTSHGLRALASTTLNEQNVFDADVIEAALSHVDKDKVRSAYNRTDYLERRRVLMGCWSDHIEEASKG
SNSITGLKALKIVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 6e-103 53
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 3e-93 53
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-93 53
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-93 53
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-102 52
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-102 52
int AAK20773.1 integrase Not tested VPI Protein 2e-102 52
int AAK20803.1 integrase Not tested VPI Protein 2e-102 52
unnamed AAA82714.1 integrase Not tested VPI Protein 2e-102 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_2463 YP_943793.1 phage integrase family protein VFG1092 Protein 6e-94 53