Gene Information

Name : Ping_2381 (Ping_2381)
Accession : YP_943717.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : alpha-D-1,4-glucosidase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 2897028 - 2898734 bp
Length : 1707 bp
Strand : -
Note : PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: eba:ebA583 exo-alpha-1,4-glucosidase

DNA sequence :
ATGTTAAATACAAGCAAGACAGTAACAAACAGCCATTATACAAAAAACTGGTGGAAAGAAGCGGTGGTTTACCAGATTTA
TCCGCGCAGTTTTATGGATTCCAATGGTGACGGTATTGGTGATCTTAAGGGTATCACCGAGCGGCTTGATTATCTTAAAG
ACCTTGGCATTGATGTTATCTGGATCTGCCCTATGTTCAAATCACCTAATGATGACAATGGCTATGACATCAGTGACTAT
CAGGAGATTATGGATGAATTTGGCAGTATGGCTGACTTCGATTGTCTGTTGGAAGCTGTGCATGCGCGTGGGATGAGATT
GATTTTGGATCTAGTGGTCAACCATACCTCCGATGAGCATCCTTGGTTTGTGGAGTCCAAAGCATCTAAGGATAGCCCCA
AACGAGACTGGTATATCTGGCGTGATGGTAACTTTGGTAAGGAGCCTAATAACTGGGAGAGCATCTTCAAGGGACCGGCC
TGGGAGTACGATCAAAGCACTGACCAGTATTATATGCACCTGTTTTCCAAAAAGCAGCCGGATCTTAACTGGGAAAATAA
GGCGGTGCGTGAAGCTATCTACAAAATGATTAACTGGTGGCTGGACAAGGGGATAGACGGTTTTCGTGTCGATGCCATTA
GCCATATGAAAAAGGAGCCAGGCTTTAAAGATATGCCTAATCCGAAGGGACTCAAAAATGTGCCGTGCTGGGATAAAATG
ATGAATGTTGGCGGTATCATCGACTATCTTGATGGCATGTGCGACAACACCTTTAGACACTATGACATTATGACGGTAGG
AGAAGCTAATGGCGTCTCTGTGAGTCAATCCAAAAACTGGGTCGGCGAGGATAAGCAGCGATTAAATATGATTTTCCAGT
TTGATCACCTTAAGCTATGGGAAGATAAACCAGATGCTCAGCTGGATCTGGTTAAGCTAAAACAGATTTTTAGCAAATGG
CAGAAAGGGTTGGAGAATATCGGCTGGAATGCCCTCTTTCTGGAGAACCATGATATCCCGCGAATAGTCTCTAAATGGGG
GGATACAAAGCACTACTGGTTTGAAAGTGCGACCTCTTTAGCAACGATGTATTTTCTGATGCAGGGCACCCCGTTTATCT
ATCAGGGGCAAGAGATTGGGATGACCAATACCCAGTTTGCCAGTATTGATGATTTTAATTGTGTTGGCGCTAAAAATCAG
TATGCCGAGTTGCGTAAGGAGGGGATGCCTGAGCAAGAGATCCTGCATCTGTTGGCACAAACAGGCAGGGATAATTCGCG
CACGCCTATGCAGTGGGATAGCACAGTTAATGCAGGCTTTAGTTCCGGTACACCTTGGCTCAAGGTAAATCCAAACTATC
AACGTATTAATGTTGCGCAGCAAGAATTGGACAAAGGATCTATTCTGAATTTTTATCGCCAGCTGATTGCCCTGCGTAAG
GCCGAACCGGTATTGGTTTATGGTCATTATGATTTATTGCTTGAAAATGATCTGCAGATTTACGCCTATACGCGCACCTT
AGGGGAGCAGCAGTTGCTGATTATGTGTAACTTGACAGGCTTGTCTGCACAATATATGCATCCAGACTGTCTACCAAAGA
GTGAACATCTGTTACTGGGTAATTACTCTGTGGCCACGCATGGAGCCGAAAATAGTCTGGTATTAAATCCCTTTGAGGCT
AGAATCTACCGCCTGTGCAAGGCTTAA

Protein sequence :
MLNTSKTVTNSHYTKNWWKEAVVYQIYPRSFMDSNGDGIGDLKGITERLDYLKDLGIDVIWICPMFKSPNDDNGYDISDY
QEIMDEFGSMADFDCLLEAVHARGMRLILDLVVNHTSDEHPWFVESKASKDSPKRDWYIWRDGNFGKEPNNWESIFKGPA
WEYDQSTDQYYMHLFSKKQPDLNWENKAVREAIYKMINWWLDKGIDGFRVDAISHMKKEPGFKDMPNPKGLKNVPCWDKM
MNVGGIIDYLDGMCDNTFRHYDIMTVGEANGVSVSQSKNWVGEDKQRLNMIFQFDHLKLWEDKPDAQLDLVKLKQIFSKW
QKGLENIGWNALFLENHDIPRIVSKWGDTKHYWFESATSLATMYFLMQGTPFIYQGQEIGMTNTQFASIDDFNCVGAKNQ
YAELRKEGMPEQEILHLLAQTGRDNSRTPMQWDSTVNAGFSSGTPWLKVNPNYQRINVAQQELDKGSILNFYRQLIALRK
AEPVLVYGHYDLLLENDLQIYAYTRTLGEQQLLIMCNLTGLSAQYMHPDCLPKSEHLLLGNYSVATHGAENSLVLNPFEA
RIYRLCKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 1e-124 47