Gene Information

Name : Ping_2058 (Ping_2058)
Accession : YP_943410.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : LacI family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 2505472 - 2506497 bp
Length : 1026 bp
Strand : +
Note : PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vpa:VPA0232 putative transcriptional regulator

DNA sequence :
ATGGAAGTGACTCGTAAACGTCGCGGGACAGGACGTGTAACATTAGCAGATGTAGCAAAAGCAGCAGGCGTAGGAACGAT
GACGGTATCTAGGGTATTAAGAATGCCCGATCAGGTTTCCGATAAACTAAGGGATAAAATACAGCAAGTTATTGATGAAT
TAGGTTATATACCTAATCGTGCCGCAGGTGCATTAGCCTCTGGGAAAAGTAACTCGATTGCGGTGATCCTTCCCTCTTTA
GTTGATAAAATGTGTTCTCAATTTATCCCCCCATTTCAAAATATACTCAATCAGGCAGGTCACCAACTAATATTGGGTTA
CAGCAATTATTCAATTTCACAAGAAGAGCAGTTACTTTCTCCTTTATTAGCAAGCAACCCCTCTGCCATCGTGCTTTTCG
GTAGCGAGCGATCTGCCCAATCGACAAAAATGATTAAAAACGCTCAGCTTACTATGCTTGAAGTGGCTGAAATAAATGAT
CTTTCCTTTGATTTAAATATTGGTATTGATCATTATCAGGCAAGCAAAGAGATGACGAATTATTTAATTAAAAAAGGTTA
TCAGAATATTGCTTTTGTCGGTTTCCAAAACGGACAAAATATTTTACGTAAGCAACTAGGTGGTTGGCAGTCAGCTATGC
TGGAAAATTACTTATCTCCAGATCATTTTTTAATAGCCAATGATCTTACTGATATAAAATTAGGCAGTGAAGGGCTCGCT
AAATTATTATTGCGGGAGAGTACGCTAGATGCTGTTATCTGCACTAATGAAGAGATTGCAACAGGCGTGTTGTTTGAATG
CCAACGACGTGTTCTTAAAATTCCGCAAGATATTGCTATAACATGTCTAGATGGTTCAATACTCAGTCAGCAATGTGTAC
CGACACTGACCAGTATCGAGCTTGACTACGTGAACATGGGTAAAGAAGCAGCCAATCTATTACTGGAAAGATTATTGGAT
AAAGAGCAGAGTGATGCTAAACAAATTAATATCGGTTTTAAGCTTTGTGAACGAGCAAGCAGTTGA

Protein sequence :
MEVTRKRRGTGRVTLADVAKAAGVGTMTVSRVLRMPDQVSDKLRDKIQQVIDELGYIPNRAAGALASGKSNSIAVILPSL
VDKMCSQFIPPFQNILNQAGHQLILGYSNYSISQEEQLLSPLLASNPSAIVLFGSERSAQSTKMIKNAQLTMLEVAEIND
LSFDLNIGIDHYQASKEMTNYLIKKGYQNIAFVGFQNGQNILRKQLGGWQSAMLENYLSPDHFLIANDLTDIKLGSEGLA
KLLLRESTLDAVICTNEEIATGVLFECQRRVLKIPQDIAITCLDGSILSQQCVPTLTSIELDYVNMGKEAANLLLERLLD
KEQSDAKQINIGFKLCERASS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vpeR ADD91728.1 putative transcriptional regulatory protein VpeR Virulence PAI-I AL862 Protein 2e-66 46
unnamed CAC39290.1 hypothetical protein Not tested LPA Protein 2e-67 46