|
Name : Ping_1666 (Ping_1666) Accession : YP_943058.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2023037 - 2024323 bp Length : 1287 bp Strand : + Note : KEGG: ppr:PBPRA1165 putative seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); seryl-tRNA synthetase, class IIa DNA sequence : ATGTTAGATCCAAAATTTTTACGTAACGATATAGAACAAACTGCATTACGATTAGCTTCTCGTGGATATACTTTAGATGT TGAATTATTAAATCAACTGGAAGAAAAAAGGAAAATTCTACAGATTACCACTGAAACCTTACAAGCCGAGCGTAATAGCC GTTCTAAAGAGGTTGGCCAAGCGGCAAAACGGGGTGAAGATATTACCCCGCTGCGCACTGAAATGGGCTTATTAGGCGAA AGATTAGACAGTGCCAAAGAAGATTTTGCACTGTTAGCAGAGCAGATTAAAAGTTTGGCATACAGTATGCCTAATTTACC GCATGAATCAGCACCTCTTGGTAAAGATGAAAGTGAAAATGTAGAAATATTAAAATGGGGTGAGCCGAAGAAGTTTGATT TTGAAGTCAAAGATCATGTTGATTTGGGCGAAGCCTTAGACGGTTTAGATTTTAAATCGGCCGTTAAAATCAGCGGCTCA CGTTTTATTGTTATGCGCGGTAAAATCGCTAAATTACACCGCGCTTTAGCGCAGTATATGCTAGATCTTCACACCGATCA TCATGGTTATACAGAGATGTATGTCCCTTATCTGGTCAATGCTGATAGTTTATACGGTACCGGGCAGCTGCCTAAATTTG GTGATGACTTGTTTAATACTAAGCCGGCAACAGAAGAAGGCATTGGTATGTCACTTATCCCAACGGCTGAAGTTCCGCTG ACTAATATGAGCCGGGATATGATCTATGATGAATCTGATTTGCCGCTTAAATTAACGGCCCATACCCCTTGTTTCAGAAG TGAAGCGGGATCCTATGGTCGTGATACGCGTGGTTTAATTCGTCAGCATCAGTTTGATAAAGTTGAAATGGTGCAGTTTG TGCATCCTGAAAAAAGTTTTGAAGCATTGGAAGAGTTAACCGGGCATGCCGAACAGGTATTAAAAAATCTGCAATTACCT TACCGTAAAGTGGTTTTATGTACTGGTGATATGGGCTTTGGCGCAACTAAAACCTATGACTTGGAGGTGTGGTTGCCTGC ACAAGATCAATATCGAGAAATTTCATCTTGCTCAAATATTGGTGATTTTCAGGCGCGCCGTTTGCAGGCGCGTTTCCGCC CGACAGGTGCTAAAAAGCCGGAGTTATTACACACTCTAAACGGCTCTGGGTTAGCAGTGGGTCGTACTTTGGTTGCTGTG CTAGAAAACTACCAACTTGAGGATGGCAGTATTGAAATCCCGCAGGTGTTACAACAATATATGGGCGGCTTGACACATAT CGGCTAG Protein sequence : MLDPKFLRNDIEQTALRLASRGYTLDVELLNQLEEKRKILQITTETLQAERNSRSKEVGQAAKRGEDITPLRTEMGLLGE RLDSAKEDFALLAEQIKSLAYSMPNLPHESAPLGKDESENVEILKWGEPKKFDFEVKDHVDLGEALDGLDFKSAVKISGS RFIVMRGKIAKLHRALAQYMLDLHTDHHGYTEMYVPYLVNADSLYGTGQLPKFGDDLFNTKPATEEGIGMSLIPTAEVPL TNMSRDMIYDESDLPLKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQFVHPEKSFEALEELTGHAEQVLKNLQLP YRKVVLCTGDMGFGATKTYDLEVWLPAQDQYREISSCSNIGDFQARRLQARFRPTGAKKPELLHTLNGSGLAVGRTLVAV LENYQLEDGSIEIPQVLQQYMGGLTHIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-101 | 52 |
