Gene Information

Name : Ping_1601 (Ping_1601)
Accession : YP_942997.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 1956483 - 1957733 bp
Length : 1251 bp
Strand : -
Note : PFAM: phage integrase family protein; KEGG: vvy:VV0817 phage integrase

DNA sequence : 
ATGGCAGTAAAAGTAATTCCCCTAACTGATAAGAAAATTAACTCAGCAAAGATTCACGATAAAGATTATGTATTATCTGA
TGGTGATGGATTACAGCTAAGAGTGAGATCTAATGGTTCTAAAATCTGGAACTTCAACTACAAACACCCACAAACAAAAA
AACGTATTAATATTAATATTGGTAAATACCCAGGTGTTGCATTACTTAATGCACGTAAAAAAGCATTGAGTTATCGTGAT
CTTCTGGCACAAGATATTGACCCTAAAGAAAACAGGGAAAAAAAATTAGCAGAAGATAAAAAAATCACTGAACACACAGT
GAAAAATGTCGCATTAGAATGGTATGAACTAAAAAAACATTCAGTAACGGCTGATTATGCCACTGATATTTGGCGCTCCT
TAGATCGTCATATCTTCCCCCTCCTTGAAAACACCCCCATATCCTCGGTTACAGCCCCAATGGTCATCGATCTATTAAGG
CCGATAGAAGCAAAAGGCAGCTTAGAAACAGTTAAACGCCTTACTCAACGTTTAAATGAAATTATGACCTACGCCGTCAA
TGGCGGTTTAATCTTTGCTAATCCGTTAAGTGGCATCAAAGCTAATTTCAAAAAACCTAAAAAATCACACATGCTCGCCC
TAACACCTGACGAACTGCCTGAATTGATGATGACCATTGCCAATGCCAGCATCAAGAGAACAACACGCTGCTTGATTGAA
TGGCAACTTCATACCATGACCCGCCCTTCTGAAAGTGCCGGTGCAAAATGGGAAGAGATTGATATTGAAGCTAAAACATG
GACTATTCCACCTGAACGTATGAAGAAACGCCGTGAACATGTGGTGCCATTGACGGATCAAGCTCTGACACTACTTGAAA
CGATGCGTCCAATCAGTGGACATAGAGAATATCTTTTCCCATCAGACCGCAACCCAAGAACTCATGCTAATAGCGAAACG
GCCAATACTGCTTTAAGACGCATGAATTTTGGTGGCCGTTTAGTGAGTCATGGATTACGTTCAATCGCCAGTACCACACT
TAATGAACAAGGCTTTGAAGCTGACCTAGTGGAAGCAGCTCTGGCACATGTCGGTGATAATCAAGTGCGTAATGCTTATA
ACCGGACTGATTATCTGGAACGCAGAAGACCAATGATGTACTGGTGGAGCGAGCATATTGAAAAAGCATCACAGGGAAAC
CTGTCTGTTACTGGGTTTAAAAGCTTAAAAGTAATAGGTGACAACTTCTAG

Protein sequence : 
MAVKVIPLTDKKINSAKIHDKDYVLSDGDGLQLRVRSNGSKIWNFNYKHPQTKKRININIGKYPGVALLNARKKALSYRD
LLAQDIDPKENREKKLAEDKKITEHTVKNVALEWYELKKHSVTADYATDIWRSLDRHIFPLLENTPISSVTAPMVIDLLR
PIEAKGSLETVKRLTQRLNEIMTYAVNGGLIFANPLSGIKANFKKPKKSHMLALTPDELPELMMTIANASIKRTTRCLIE
WQLHTMTRPSESAGAKWEEIDIEAKTWTIPPERMKKRREHVVPLTDQALTLLETMRPISGHREYLFPSDRNPRTHANSET
ANTALRRMNFGGRLVSHGLRSIASTTLNEQGFEADLVEAALAHVGDNQVRNAYNRTDYLERRRPMMYWWSEHIEKASQGN
LSVTGFKSLKVIGDNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20803.1 integrase Not tested VPI Protein 9e-140 66
unnamed AAA82714.1 integrase Not tested VPI Protein 9e-140 66
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 1e-139 66
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 1e-139 66
int AAK20773.1 integrase Not tested VPI Protein 9e-140 66
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 3e-102 55
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 3e-102 55
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-102 55
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 7e-112 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_1601 YP_942997.1 phage integrase family protein VFG1092 Protein 1e-102 55