Gene Information

Name : Ping_1598 (Ping_1598)
Accession : YP_942995.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1953936 - 1954175 bp
Length : 240 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory; KEGG: vvy:VV0810 predicted transcriptional regulator

DNA sequence :
ATGACGACCAAATCTAAAAAAATTATTCGCTTACCAGAAGTAAAGGATATGACAGGGCTCGCGCGGGCAACAATCTATAA
AAAAATGGCCACAGATGATTTTCCCATGAGTATTAACCTCAGTAGTGGCTGTGGCCGCGCAGTCGGCTGGGTAGAAATCG
AAATTTTGGATTGGATTAATGAACGCATTGAAGAACGCGATCAACAGATTGAAGCGAAAAAAAATAGTGAGAATTGCTGA

Protein sequence :
MTTKSKKIIRLPEVKDMTGLARATIYKKMATDDFPMSINLSSGCGRAVGWVEIEILDWINERIEERDQQIEAKKNSENC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 2e-10 50
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 8e-08 44
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 1e-05 41
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 4e-09 41
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 1e-10 41
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 41
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_1598 YP_942995.1 phage transcriptional regulator AlpA VFG1141 Protein 6e-11 41