Gene Information

Name : Ping_1544 (Ping_1544)
Accession : YP_942951.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : peptidase M23B
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0739
EC number : -
Position : 1893078 - 1894088 bp
Length : 1011 bp
Strand : +
Note : PFAM: peptidase M23B; KEGG: vpa:VPA1649 putative TagE protein

DNA sequence :
ATGAAAGATAAATCAATTATTACCATCTCTACCATTAATGGTACAAGAGGGTTTCATCTAGCCCCATGGCACTTTAAAAC
ATTTAAAATAGTCTCTGCATTAATTGTATTTTTTTTCCTAGCTCTCACCATAAATTTATTTGAGCTCTCTGATAAAATGG
ACCAAGTGACTCTTTCTGAGAACCAATTAATAAGCCAAGCAAATAAATTACAACACCAATTAATAAGCCAAGAAAATACA
TTGCAAGGTACCATTACTGATTTAAGTGATGAAAAGCTAGAACTTAAACAAGACATAAATCAACGTGATTCTATGTTAGA
TAAGTTTTACACACGATTAAATAATCTAGAAAATTACTTAGAAGGTGATTCTTCGCTTAATGATACAAAACAAAACTTAG
GTGCCAGCGAAAGTATTGATAGTCGTTTAAATGCAGCAACCATAAACTCAGCACTCAGAATCAACTTTCTACGCAATGTA
CCTAATGGATCACCAGTAAAAAAAGCTCGATTATCATCACAATTTGGATACCGCACTCACCCTGTGACCAAGAAACGGAA
AAAGCACAGAGGTTTGGATTTTGCAGTTAATACTGGAACGCCTATCTATGCCACTGCAGATGGTGTTGTTGAAATGGCAA
GGAAAAGTAATTTAGGCTCTGGAAATTTTTTACGTATTCAGCATAGCCATGGTTTCAGTAGTTCTTTTTCTCACATGAAA
TCTTTCAAAGCACACAGTGGTCAGTTTGTTGAAAAAGGGCAATTAATTGGATATTCTGGCAATACTGGTATGTCTTCAGG
TCCGCACTTGCATTATGAAATTCGTTTTGTAGGACGAGCCTTAGATCCACTCAATTTCGTGAGATGGAATAATGATAACT
TCGATACAATATATGAAAAAGAAAAGGGAATAAAATGGGATTATTTAGTTCAAAAACAGGAACAACAGATCAACATTCAA
CTGCAACTGTTATCGCAACTGGATGCAGCATTACTGGTACAGTCCAATTAG

Protein sequence :
MKDKSIITISTINGTRGFHLAPWHFKTFKIVSALIVFFFLALTINLFELSDKMDQVTLSENQLISQANKLQHQLISQENT
LQGTITDLSDEKLELKQDINQRDSMLDKFYTRLNNLENYLEGDSSLNDTKQNLGASESIDSRLNAATINSALRINFLRNV
PNGSPVKKARLSSQFGYRTHPVTKKRKKHRGLDFAVNTGTPIYATADGVVEMARKSNLGSGNFLRIQHSHGFSSSFSHMK
SFKAHSGQFVEKGQLIGYSGNTGMSSGPHLHYEIRFVGRALDPLNFVRWNNDNFDTIYEKEKGIKWDYLVQKQEQQINIQ
LQLLSQLDAALLVQSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagE ACK75650.1 TagE protein Virulence VPI Protein 3e-38 43
tagE ACK75653.1 TagE protein Virulence VPI Protein 2e-38 43
tagE ACK75659.1 TagE protein Virulence VPI Protein 1e-38 43
tagE ACK75665.1 TagE protein Virulence VPI Protein 1e-36 42
tagE ACK75644.1 TagE protein Virulence VPI Protein 1e-37 42
tagE ACK75662.1 TagE protein Virulence VPI Protein 1e-37 42
tagE ACK75668.1 TagE protein Virulence VPI Protein 1e-37 42
tagE AAK20770.1 unknown Not tested VPI Protein 1e-39 41
tagE AAK20800.1 unknown Not tested VPI Protein 1e-39 41
unnamed AAA82708.1 - Not tested VPI Protein 1e-39 41
VC0843 NP_230491.1 TagE protein Virulence VPI-1 Protein 2e-39 41
tagE ACK75647.1 TagE protein Virulence VPI Protein 2e-38 41
tagE-1 YP_001216323.1 tagE protein Not tested VPI-1 Protein 2e-39 41