Gene Information

Name : Ping_0011 (Ping_0011)
Accession : YP_941485.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 17602 - 18108 bp
Length : 507 bp
Strand : +
Note : PFAM: Uncharacterised conserved protein UCP028301; KEGG: vfi:VF1004 hypothetical cytosolic protein

DNA sequence : 
ATGTCTATGAAAGACAAGCGCTCAGGTTCAGTTGCACCTAAAGAGCGTATTAATATATCTTATAAACCAGCGGTAGGTAA
CGCTAAAGAAGCCGTTGAACTCCCTTTTAAACTGCTAGTCTTAGGAGATTTCACCCAAAGTCAAATAGTTACTTCTCTGG
AAGATAGAAAGTTAATTAATATAAATAAATATAATTTCTCCGATGTAATGGATAGCTTTGACCTTAAAGTTCAATTTAGT
GTAGAAAATAAAATCAATAAAGGAAGTGATGAGCCAATTGATATATCTCTAAGTATAAAACAGTTAAGTGACTTTGAACC
AGATAGTATTATCCAACAAGTTGATGAATTGAAAAAAGTTCTTGAGCTTCGAGAGGCATTAAAAGCACTGAAAGGCCCAA
TCGGTAATTCCCCTCAAATGCGTAAACAAATACGCAACCTTTTAATTGATGAAAAATCACGAAATGAATTAAAACTTGAG
CTGGGTTTATCTGCTAATAAACAATAA

Protein sequence : 
MSMKDKRSGSVAPKERINISYKPAVGNAKEAVELPFKLLVLGDFTQSQIVTSLEDRKLININKYNFSDVMDSFDLKVQFS
VENKINKGSDEPIDISLSIKQLSDFEPDSIIQQVDELKKVLELREALKALKGPIGNSPQMRKQIRNLLIDEKSRNELKLE
LGLSANKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 4e-27 44
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-31 41
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 4e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_0011 YP_941485.1 hypothetical protein VFG2092 Protein 6e-33 48
Ping_0011 YP_941485.1 hypothetical protein VFG2474 Protein 3e-31 45