Gene Information

Name : Ping_1440 (Ping_1440)
Accession : YP_942856.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1773649 - 1774812 bp
Length : 1164 bp
Strand : +
Note : KEGG: ppr:PBPRA0797 putative pyrimidine deaminase/pyrimidine reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGAACACAACGGCTTTTTCAGACTTAGATAAATACTATATGGCCCATGCGATACTGCTGGCCAAAAAAGGGCGCTTTAC
CAGCTCACCCAATCCTAATGTGGGTTGTGTGATTGTTGCAAATAATATAATAGTGGGGGAAGGATATCATCAAAAAGCAG
GCCTCGGACATGCCGAAGTAAATGCCCTTGCGATCGCTAAAGACAAAGCGATGGGTGCAACCTGTTACGTGACCTTAGAG
CCCTGCTCCCACTTTGGCCGTACACCTCCCTGCGCGCTAGCCTTAACTAAAGCTGGGATTAAGCGTGTGATCATTGCGAT
GGTTGACCCTAACCCTAAGGTCGCAGGAGATGGCATTAAAATATTAGAGAAGGCGGGTATAAAAGTTGACCTTGGTCTGC
TTAAAAATGAAGCGATGGATTTAAACCGTGGTTTTATTAAACGGATGCAGGTTAAAGAGCCTCGTGTAACAGTGAAACTT
GCCAGTAGTTTAGACGGTAAAACGGCCCTTAAAAATGGCCAAAGCCAGTGGATAACAGGCCCTGCTGCGCGTTGTGATGT
GCAATATTTCCGCGCCCTGCAAAGCGCTGTATTAACTGGCAGCGCGACCGTGATTGCCGATAATCCAAGCTTAAATGTGC
GCTATGAAAGCTTAAAAAATCATCTGGATTTTGATCTGACATTGAGACCTGCTGAGATACGCCAACCGATACGTATTATC
TTAGATTCCCACAATAAAATCACCCTTAAGGAAAAATTATTTTCACTTGAAGGTAAAGTGTTGTTGGTGTCCCTGCTTCC
CCGTGACGATTTACCAAAAAATAAAAATCAATTCAGCGCTGATATTGAACAACTGATCGGCACAGATGATGGCCATGGTC
GGATTAACCTTAAGGTCTTATTAACCCAGTTAAGTGATTATGAAATCAACGATCTTTGGGTTGAGGCCGGAGCGACACTC
GCGGGTGAGTTTTTTAATCATCAGTTGGTGGATCAATTTATTCTTTATCAGGCACCAAAATTAATGGGCAGTCAGGCGCG
AGATTTAGTAAACTTGCCTGATTATTCAAAAATGATTGAGGTTGTGCAATTATCACTGCAGAGTGTGGTTTTAATTGGCA
ATGATATTCGCATTATAAGTAACATTACAAGTGACAGGGGTTAA

Protein sequence :
MNTTAFSDLDKYYMAHAILLAKKGRFTSSPNPNVGCVIVANNIIVGEGYHQKAGLGHAEVNALAIAKDKAMGATCYVTLE
PCSHFGRTPPCALALTKAGIKRVIIAMVDPNPKVAGDGIKILEKAGIKVDLGLLKNEAMDLNRGFIKRMQVKEPRVTVKL
ASSLDGKTALKNGQSQWITGPAARCDVQYFRALQSAVLTGSATVIADNPSLNVRYESLKNHLDFDLTLRPAEIRQPIRII
LDSHNKITLKEKLFSLEGKVLLVSLLPRDDLPKNKNQFSADIEQLIGTDDGHGRINLKVLLTQLSDYEINDLWVEAGATL
AGEFFNHQLVDQFILYQAPKLMGSQARDLVNLPDYSKMIEVVQLSLQSVVLIGNDIRIISNITSDRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-57 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-57 45