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Name : Ping_0133 (Ping_0133) Accession : YP_941603.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 175017 - 176324 bp Length : 1308 bp Strand : - Note : TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ppr:PBPRB1879 C4-dicarboxylate transport system, putative integral membrane protein DNA sequence : ATGGAATGGCAAATCATTCTTACTCTTTTTGGGAGTTTTGCTGTGCTCCTCGTCATAGGTGTGCCGGTTTCGTTTGCGAT TGGTTTATCTTCACTTGCAACTATAATGCTAAGCCTTCCAGCAGGTCCTGCCATTGCTGTCATAGCACAACGTATGGCAA GCGGGTTAGATAGCTTTGCTCTGTTAGCTATCCCATTTTTCATTTTAGCGGGTAATATAATGAATCAGGGAGGTATTGCT ACCCGCCTGATAAACCTGGCTAAAGTGCTTGGAGGGCGCTTACCTGGTTCACTTGCACACGTTAACGTCATTGCAAACAT GATGTTTGGTTCAATTTCAGGTTCAGCCGTCGCCTCCGCGGCGGCAGTAGGTGGAACAATGGCGCCACTGCAAAAGAAAG AGGGTTATGATGAACATTTTTCTGCAGCGGTCAATATCACTTCTTGCCCGACAGGTTTGTTAATTCCCCCAAGTAATACC TTGATTGTATTTTCATTAGTTTCCGGCGGGACATCTATCGCGGCGCTTTTCTTGGCGGGTTATATTCCAGGGCTAATTAT GGGGTTAAGCTTAATGTGCGTCGCCGGGTTTATTTCCAAGCGTCGTGGCTACCCTCTCGCGCCGAGAGCACCCTTATCTG AAGTTATTGACACTACATTAAAAGCCCTCCCTTCTTTAACACTCGTTATTATTATCATGGGAGGTATCATAGCCGGTATT TTTACGGCAACAGAAGCATCGGCAATCGCGGTGGTTTATACCTTTTTACTGGCATTTGTTTTTTACCGTGAAGCCAAATT GAGCGAGCTGCCAAAGATTATTTTAGAATCAGCAGTGACGACCTCTATTGTTTTATTATTGATCGGCGCTTCAATGGGCA TGTCATGGGCCATGGCTAACGGTGATATTCCTTACATGATTGCTGATGCGCTACTTGCTGTTTCGGATGACCCATTGATT ATACTTTTGATTATTAACGTTATTTTGTTAATCATCGGTATCTTCATGGACATGACACCGGCAGTGCTTATTTTTACACC TATCTTTTTACCTATTGCATTAGACTTAGGTATCGACCCTGTGCACTTCGGCATAATGATGACCTTTAACCTTGCTATCG GTCTTTGTACCCCCCCCGTAGGCAGCGCGCTATTCATTGGTTGTTCTGTTGCAAAAATATCCATTGATAAAGTCATTAAA CCCTTATTACCCTTCTACGCTGCTCTAATTGTTGCGCTTATGGCCGTTACCTTTATTCCTGAGCTAAGCCTTTACTTACC CAGGTTATTTCTAGGTTACGGTGACTAA Protein sequence : MEWQIILTLFGSFAVLLVIGVPVSFAIGLSSLATIMLSLPAGPAIAVIAQRMASGLDSFALLAIPFFILAGNIMNQGGIA TRLINLAKVLGGRLPGSLAHVNVIANMMFGSISGSAVASAAAVGGTMAPLQKKEGYDEHFSAAVNITSCPTGLLIPPSNT LIVFSLVSGGTSIAALFLAGYIPGLIMGLSLMCVAGFISKRRGYPLAPRAPLSEVIDTTLKALPSLTLVIIIMGGIIAGI FTATEASAIAVVYTFLLAFVFYREAKLSELPKIILESAVTTSIVLLLIGASMGMSWAMANGDIPYMIADALLAVSDDPLI ILLIINVILLIIGIFMDMTPAVLIFTPIFLPIALDLGIDPVHFGIMMTFNLAIGLCTPPVGSALFIGCSVAKISIDKVIK PLLPFYAALIVALMAVTFIPELSLYLPRLFLGYGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 3e-54 | 41 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-54 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-54 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ping_0133 | YP_941603.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 1e-54 | 41 |
