Gene Information

Name : Ping_1192 (Ping_1192)
Accession : YP_942625.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1485192 - 1485836 bp
Length : 645 bp
Strand : +
Note : PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: vvy:VV1233 response regulator

DNA sequence : 
GTGATAAATATCCTGTTGGTTGATGACCATGAATTAGTTCGTACAGGGATTTGCCGTATCATTGATGATGTTCGAGGCAT
GAAAGTTATTGGAGAAGCACAAAGTGGTGAAGAGGCCGTAAAATGGTGCCGAAAAAATCACCCCGATGTTGTGTTAATGG
ATATTAATATGCCAGGGATGGGTGGTTTAGATGCAATGCACAAAATTTTGCGTATCAATGAAGATTTAAAAATCATTATG
CTAACAATGCATACCGAGAATCCTTTCCCCTCAAAAGTAATGCAGGCAGGTGCGTCCGGTTACATAAGTAAATCTGCCGG
CCCCGATGAAGTATTAAACGCGATCCGTTTGGTGCATTCCGGGCAACGTTATTTGGCGCCTGAAATTGCACAGAAAATAG
CACTTTCACAACTGTCTCCGACTGCGGATGATCCATTTAGCGTGCTATCAGAAAGAGAGTTACAAATTATGATGATGATA
ACCAAGGGGCAGCGTGTGGTGGATATATCGGAGCAACTTGGTTTAAGCCCAAAAACAATTAATAGCTACCGCTATCGTTT
GTTTGATAAACTCGATGTAAAGGGTGACGTTGGTTTGACTCATTTGGCGATACGTTATGGCATGCTTGATACAGCTATGC
TGTAA

Protein sequence : 
MINILLVDDHELVRTGICRIIDDVRGMKVIGEAQSGEEAVKWCRKNHPDVVLMDINMPGMGGLDAMHKILRINEDLKIIM
LTMHTENPFPSKVMQAGASGYISKSAGPDEVLNAIRLVHSGQRYLAPEIAQKIALSQLSPTADDPFSVLSERELQIMMMI
TKGQRVVDISEQLGLSPKTINSYRYRLFDKLDVKGDVGLTHLAIRYGMLDTAML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 5e-51 49
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 5e-51 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_1192 YP_942625.1 LuxR family transcriptional regulator VFG1889 Protein 1e-49 46