|
Name : Ping_1164 (Ping_1164) Accession : YP_942599.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 1452883 - 1453890 bp Length : 1008 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: plu:plu3016 transposase, IS30 family DNA sequence : ATGCTAATCGCTTTTTCTCCGGCAAGAGATGCAACAATGAAAACATATAACCAACTGACCTACGAACAACGATGCCAGAT TTATGCCTTAAAGAAAACAGGTTTGAGTCAAAATAAAATAGCAAAGCAACTAAGTGTTAGCCACTCAACGATTAGCAGGG AGTTGTCCCGTAATACAGGTAAGCGTGGTTATCGTATTCAGCAAGCTCAAATATCATCAGATAAGCGTCGATTAGCCGCT TGTAAAGCCATTAAAATGACAACAAGTCTCATTGAGTTAATTGACTCCAGAATTAAAGAAAAATGGAGTCCAGAGCAGAT ATCAGGCAGGCTTAGAGAGCAACAAAGCATCAATATTAGCCATGAAACCATTTATCAGCATGTTTGGTCAGATAAAAAAA GTGGCGGTAACTTATTCAAAAAATTACGTAGGAAAGGAAAAATTTACCAAACACGCAATAAAGATAAGCAAGCAGGTAGA GGGTTTATAAAGAACCGCATAAGTATTGATGAGCGCCCACAAGTTGTTGATGATAAAAGCAGAATGGGTGATTGGGAAAT CGACCTGGTTATTGGCAAAGGACACAGTGGCGCGTTGGTCACTATTGTAGAGCGGAAAACTAGCTTTACGGTGTCGACAC GTGTAGATGACAAATCAGCGAAAACAGTCACAGCAGCGACCATTGCTTTGTTAAAACCGTTTGAAGATTCCGTAATAACG ATCACTGCGGATAATGGTAAAGAATTTGCTTATCATGAAGAAATGACTGAGAGTTTGAAATGTGATGTGTATTTTGCAGA TCCTTATTGTTCGTGGCAACGAGGATTGAATGAAAACACCAATGGTCTATTACGACAATATTGGCCGAAATCAACAGACT TCAAAAAAGTATCGCAATCAGAAGTTCAAGATGTAATAGTCAAACTCAATGATAGACCAAGAAAAAAAAAAAATTACAAA ACGCCAGCCAAATTAATGGCTGAACATAGAGTGGCTATAGCCGCTTAG Protein sequence : MLIAFSPARDATMKTYNQLTYEQRCQIYALKKTGLSQNKIAKQLSVSHSTISRELSRNTGKRGYRIQQAQISSDKRRLAA CKAIKMTTSLIELIDSRIKEKWSPEQISGRLREQQSINISHETIYQHVWSDKKSGGNLFKKLRRKGKIYQTRNKDKQAGR GFIKNRISIDERPQVVDDKSRMGDWEIDLVIGKGHSGALVTIVERKTSFTVSTRVDDKSAKTVTAATIALLKPFEDSVIT ITADNGKEFAYHEEMTESLKCDVYFADPYCSWQRGLNENTNGLLRQYWPKSTDFKKVSQSEVQDVIVKLNDRPRKKKNYK TPAKLMAEHRVAIAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB1770 | NP_274770.1 | IS30 family transposase | Not tested | IHT-C | Protein | 2e-50 | 43 |
