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Name : Ping_0099 (Ping_0099) Accession : YP_941572.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 132936 - 134126 bp Length : 1191 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: shm:Shewmr7_0153 general secretion pathway protein F DNA sequence : ATGGATGATCGAGGAAAACTGAAAAAAGGTACTGAAGAAGCTGATTCGGCACGCTTGTTGCGGCACCAGTTACGCACAGC GGGTTTAACTCCCCTTGAAATTGAAGTTGTTAGCAACGAGTCTCCAAAAAAAGGAGGCAGTCTATTCAGTAAAAAAATAA AAACCGCTGATTTAGCCTTAATTACGCGTCAATTATCGACTCTGGTTGCATCAGCCATTCCCCTTGAGGAATGTTTGCAC GCAGTGGCTGAGCAGTGTGATAAACCCAACATAAAGGGCATGATTGTCTCGGTACGGGGCGGAGTGCTTGAAGGAAATAG CCTGGCAGACAGCATGCGCGCATTTCCATTGATTTTTGATAACCTGTTTTGCTCGATGGTTGCGGCGGGTGAAAAATCAG GACATCTTGATCAGGTACTGGATCGTTTGGCAGATTACGCAGAGCAACGCGAAGAGATGAAAAGCAAAATGACGCAGGCA TTGATTTATCCGCTGATATTAACCTTAGTCGCCATTTCTGTTGTGGCTATTTTATTAACCTCAGTGGTGCCGCAAGTGGT TGGGCAGTTTGAACATATGAGCGCAGATCTACCCGCTTCAACTAAGTTTCTGATCGCCGCCAGCGATGGCTTAAACAGTT ACGGATTAATTATTGTTATCCTTATTTTTGCTTCACTGTTTATTTTCAAAAGGTTACTTAGAAAACCTGCTAATCAGTTA TTGTTTGATCAGAAACTGCTTAAATTTCCCGTTGTTGGGCGTGTCGCTAACGAACTGAATACTGCTCGTTTTGCCCGTAC CTTGAGTATTCTAAATAGCAGTGCCGTGCCCTTATTAGAAGCACTGTCGATAGCCGGAAATGTATTAAGCAACCAATTTA TACGTCTCAAAGTCAGTGAGGCGACGGAGCGTGTCCGAGAGGGCACAAGTCTAGGGCAAGCCTTAGACAGTACAAAATTG TTTCCTCCAATGATGTTACATATGATAAAAAGCGGGGAACGCAGTGGAGAAATAGGTAATATGCTTGAACGATCTGCTGA TAATCAGGACAAACAGTTTGCGGCACAGGTAACCATTGCACTGGGTATTTTTGAACCCGCTTTGGTTATCTCCATGGCGG GTATCGTTTTATTTATCGTCATGGCAATATTACAACCCATTTTGCAGTTGAATAATATGGTGTCAGGTTAA Protein sequence : MDDRGKLKKGTEEADSARLLRHQLRTAGLTPLEIEVVSNESPKKGGSLFSKKIKTADLALITRQLSTLVASAIPLEECLH AVAEQCDKPNIKGMIVSVRGGVLEGNSLADSMRAFPLIFDNLFCSMVAAGEKSGHLDQVLDRLADYAEQREEMKSKMTQA LIYPLILTLVAISVVAILLTSVVPQVVGQFEHMSADLPASTKFLIAASDGLNSYGLIIVILIFASLFIFKRLLRKPANQL LFDQKLLKFPVVGRVANELNTARFARTLSILNSSAVPLLEALSIAGNVLSNQFIRLKVSEATERVREGTSLGQALDSTKL FPPMMLHMIKSGERSGEIGNMLERSADNQDKQFAAQVTIALGIFEPALVISMAGIVLFIVMAILQPILQLNNMVSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 8e-97 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-96 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ping_0099 | YP_941572.1 | general secretion pathway protein F | VFG2049 | Protein | 6e-94 | 53 |
| Ping_0099 | YP_941572.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-85 | 47 |
